Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 4e-15
>seq1
Length=402072
Score = 96.9 bits (106), Expect = 4e-15
Identities = 259/391 (66%), Gaps = 15/391 (4%)
Strand=Plus/Plus
Query 138187 CAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAAT 138246
|||| || || || ||||| || || || ||||| || |||||||| |||||||| | ||
Sbjct 147933 CAATGGGTCCAACTCCAGGTCCACCTCCACCATGAGGTATACAGAAAGTCTTATGCAGAT 147992
Query 138247 TTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTA 138306
| ||||| || || || || ||| |||| || | ||| || | ||||| || |
Sbjct 147993 TGAGATGGCACACGTCGGCTCCAATCTCACCAGGGCTGCATAGTCCAATTTGTGCGTTCA 148052
Query 138307 GATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGTC 138366
|| ||||| || | || || || || || | || || || | || || | ||
Sbjct 148053 TGTTGGCACCGTCCATGTAAACTTGCCCGCCGTGTTCGTGCACAAGCTCGCACACACGTT 148112
Query 138367 TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGTT 138426
|||| | | ||||| ||||| || |||||| || | ||| ||| | ||| |
Sbjct 148113 TGATCTCAGGCTCAAAGACACCGAACGTGCTTGGATACGTGACCATGATAGCAGCGAGAT 148172
Query 138427 CAAATGTATTCATGATTGCTTT---CTTCTCT---AGATCTTTGATGTCTATGTTGCCA- 138479
||| |||| || ||| ||| ||| || ||||| | || | |||||||
Sbjct 148173 ----TGTCAGCATGCTT--TTTGCACTTGTCTTCAAGGTCTTTTAAATCGAGGTTGCCAG 148226
Query 138480 TCATCAT--CACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGAT 138537
| || | |||| |||| ||||||||||| || ||||| | ||||| || ||||
Sbjct 148227 TTTTCGTGTCACATTTGATTGTAACAACTTTCATGCCAGCCATCGCAGCACTCGCGGGAT 148286
Query 138538 TAGTTCCATGTGCTGACTCTGGTATCAGACA 138568
| || ||||| ||||| | || ||||| ||
Sbjct 148287 TTGTGCCATGAGCTGATACAGGGATCAGGCA 148317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578996829466840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |