Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq154 122 2e-22
>seq154
Length=71981
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | ||| |||| |||| || | ||| | || || |||||| ||||||
Sbjct 41247 ATGCCACCACGAAGTCGTAGAACTAGGTGAAGAGTCGATTCCTTCTGGATATTGTAATCA 41188
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| ||||| | || |||| ||| |||||||||||||| | || ||| || || ||
Sbjct 41187 CTCAAAGTTCGGCCGTCTTCCAGTTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGA 41128
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || || ||||| || ||||| | || ||||| || | ||| || || ||
Sbjct 41127 GGAATACCCTCCTTATCCTGGATTTTGCTCTTGACATTGTCGATGGTATCGGAAGACTCA 41068
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || ||||| || || |||||||| ||||| || | ||| ||||||||
Sbjct 41067 ACCTCGAGAGTGATTGTCTTACCAGTCAATGTCTTCACAAAAATCTGCAT 41018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984477262837950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |