Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq154 113 4e-20
>seq154
Length=71981
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||||||||||||||||||| | |||||||||||||| || ||||| ||| |
Sbjct 41246 ATGCAAATTTTTGTCAAAACTCTCACAGGCAAAACCATAACACTCGAAGTGGAATCATCT 41305
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | || || || || || || ||||| | || || |||
Sbjct 41306 GATACCATCGATAACGTTAAGTCGAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAG 41365
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | | || | || || |||||||||||||| | ||| || | || ||||||
Sbjct 41366 CAGCGGTTGATCTTCGCAGGCAAACAGCTGGAGGATGGTCGAACCTTGTCAGATTACAAC 41425
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| || |||||||| ||||| | ||| ||||||||||||| ||
Sbjct 41426 ATTCAGAAAGAGTCTACACTGCACCTTGTGCTGAGATTGCGAGGTGG 41472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398875745095513
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |