Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq154 95.1 1e-14
seq123 86.0 6e-12
>seq154
Length=71981
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233
|||||| | ||||| || ||||| || || || | ||||| |||| || || |
Sbjct 41017 CATGCAGATTTTTGTGAAGACATTGACTGGTAAGACAATCACTCTCGAGGTTGAGTCTTC 41076
Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|||||| ||||| | || || ||||| ||||| |||||||| || ||||| ||
Sbjct 41077 CGATACCATCGACAATGTCAAGAGCAAAATCCAGGATAAGGAGGGTATTCCTCCCGACCA 41136
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
||| ||||||| | | || || ||||| ||||| | ||| | | || ||||||||
Sbjct 41137 GCAGCGACTCATCTTTGCTGGTAAGCAACTGGAAGACGGCCGAACTTTGAGTGATTACAA 41196
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGT 25383
||| || || ||||| || |||| ||||
Sbjct 41197 TATCCAGAAGGAATCGACTCTTCACCTAGT 41226
>seq123
Length=109856
Score = 86.0 bits (94), Expect = 6e-12
Identities = 179/264 (68%), Gaps = 2/264 (1%)
Strand=Plus/Minus
Query 138142 ACGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGAGTTCTA 138201
||||| | || || ||||| | | || || |||||||| || || || ||
Sbjct 47705 ACGTTCAATCCAATACCGCCGGCATTCTTTGAGATCATGGCGCAGGTCTTTAGCGTATCG 47646
Query 138202 TAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATAACACGACGACATTTGAGGC 138261
||||| || | || ||| |||| |||| || | |||| || |||||||||| |
Sbjct 47645 TAGATTCCCTCGATCGAGTCCTCCTTCATGTCGATCAAGAAACATGATGACATTTGAG-C 47587
Query 138262 ATTTTCA-TGCCAGCCGAGAATAGAGTGGGACTAGCGTGGGTAAACATTTTCGAGCGCAT 138320
|||| |||| || ||| || ||||| |||||| || ||||| ||| | |||
Sbjct 47586 ATTTGGTGTGCCTGCATTGAAGAGGGTGGGCGAAGCGTGTGTGAACATCTTCTGGGACAT 47527
Query 138321 CAATCTATATGACTCGATCGCACTCTCGATATCATCACCATGAATCTGAAGAGCGACACG 138380
| | |||| ||| || | |||||||||| || |||||||| || || || ||
Sbjct 47526 GAGATTGTATGTCTCAATGACCTTCTCGATATCTTCTCCATGAATGCCAACAGACACGCG 47467
Query 138381 CATCAGCATGTGTTGAGGTCTCTC 138404
|||||||||||| || ||||| ||
Sbjct 47466 CATCAGCATGTGCTGTGGTCTTTC 47443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445093192681440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |