Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq85 190 3e-42
seq123 152 7e-31
>seq85
Length=245923
Score = 190 bits (210), Expect = 3e-42
Identities = 369/532 (69%), Gaps = 26/532 (5%)
Strand=Plus/Minus
Query 1455791 CAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGG- 1455849
||| || ||||| |||||||| ||||||||||| || |||||||| | ||| |
Sbjct 84984 CAAGAAAGCCGAAGCCTCCTTCTGGACCGCCGAAGAAGTCGACCT----GTCGAAAGATC 84929
Query 1455850 TCCACTGGGTGTC-------GCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTC 1455902
||||| | || | ||| | ||| ||||| || | ||| | |||||||||
Sbjct 84928 TCCAC-GACTGGCACCACAAGCTCAACGATGACGAACGTTACTTCGTTTCCCACGTCCTC 84870
Query 1455903 GCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAA 1455962
|| ||| ||||||||| || |||||||| ||||||||| | || |||||
Sbjct 84869 GC-TTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTTGTCGAGCGCTTCTCCGG 84811
Query 1455963 AGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACAT 1456022
|| |||||| | || || || || | ||||| || ||||||||| || ||||||||
Sbjct 84810 CGAAGTCCAAGTCCCCGAAGCCCGCTGCTTTTATGGCTTCCAGATCATGATGGAAAACAT 84751
Query 1456023 CCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAG-AAGG 1456081
|||| |||| ||||| || || || ||||| ||| | || || || || || |
Sbjct 84750 CCACAGCGAAATGTACTCACTTCTCATTGACACATACATTAAAGAGCC---AAAGCAAAG 84694
Query 1456082 AC--CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGC 1456139
|| ||||||| ||||||||| || | || | | || || || || || |||||
Sbjct 84693 ACAATACCTCTTCGACGCCATCGATACAATTCCTTGCATTAGAAAGAAAGCTGAATGGGC 84634
Query 1456140 GATGAAGTGGA-TCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGC 1456198
| |||| | | | ||| | || || ||||||| |||| || |||| ||||||
Sbjct 84633 TCTCCGCTGGATTTCAGATCGAGAG--TCCAC-CTTTGCCCAGCGTCTGGTCGCCTTTGC 84577
Query 1456199 CGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCG 1456257
||| || || || ||||| ||||| ||| ||| | ||||||| ||||||||||||||
Sbjct 84576 CGCTGTGGAAGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCG 84517
Query 1456258 CGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309
|| ||||||||||| ||| ||| ||||||| ||||| || |||||
Sbjct 84516 AGGTCTCATGCCCGGCCTT-ACCTTCTCCAACGAACTTATCTCCCGGGACGA 84466
Score = 104 bits (114), Expect = 3e-16
Identities = 178/253 (70%), Gaps = 4/253 (2%)
Strand=Plus/Minus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||||||||||||||| |||||||| |||| || ||| |||| |||| || || ||
Sbjct 84389 ATCATCGTCGAGGCCGTCCAGATCGAGCAAGAATTCCTCACCGAGGCGCTCCCCGTTGCT 84330
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| | ||||||||| | | ||||||| |||||||||| | || || |||||||| |
Sbjct 84329 CTACTGGGCATGAACTCGA-AGCTCATGAAGCAGTACATTG-AGTTCGTTGCCGACCGGC 84272
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
|| | | | || | |||| ||||| | |||| ||||| | |||
Sbjct 84271 TG-TTGGTAAGTATGGGTAACCCGAAGTACTACAAGGTCACCAATCCGTTTGACTTTATG 84213
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761
||| ||||| || | |||||||||||| || |||||| || || || || |||
Sbjct 84212 GAGAACATCTCTCTAGCGGGCAAGACCAATTTCTTCGAGAAGCGAGTGGGTGACTACCAA 84153
Query 1456762 AAGGCCGGCGTCA 1456774
||||| || ||||
Sbjct 84152 AAGGCTGGTGTCA 84140
>seq123
Length=109856
Score = 152 bits (168), Expect = 7e-31
Identities = 209/292 (72%), Gaps = 0/292 (0%)
Strand=Plus/Plus
Query 259894 CATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953
|||||| ||| || ||||||| || ||||||| ||||| ||||| ||||| ||
Sbjct 47526 CATGTCCCAGAAGATGTTCACACACGCTTCGCCCACCCTCTTCAATGCAGGCACACCAAA 47585
Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013
| || | || || || || || | |||||||||| || ||||||||||| |||||
Sbjct 47586 TGCTCAAATGTCATCATGTTTCTTGATCGACATGAAGGAGGACTCGATCGAGGGAATCTA 47645
Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073
|| ||||| ||| ||||| | ||||| ||| |||||||| || || || ||
Sbjct 47646 CGATACGCTAAAGACCTGCGCCATGATCTCAAAGAATGCCGGCGGTATTGGATTGAACGT 47705
Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133
||||| | || || | ||| |||| | || ||||| |||||| || ||||||||
Sbjct 47706 CCACAAAATTCGAGCGACTGGCTCCTATATCGCAGGCACAAACGGCACATCAAACGGCCT 47765
Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185
||| || ||||| || || ||| || | || || || |||||||||||| ||
Sbjct 47766 TGTCCCTATGCTCCGAGTCTTTGACAATACTGCTCGATACGTCGACCAGGGC 47817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177790269951154
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