Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202 012-11-26] 217 sequences; 28,364,325 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq85 91.5 5e-13 >seq85 Length=245923 Score = 91.5 bits (100), Expect = 5e-13 Identities = 124/172 (72%), Gaps = 1/172 (1%) Strand=Plus/Minus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||| | | |||| || ||||| ||||| | || ||||| | || || |||| Sbjct 84606 CACCTTTGCCCAGCGTCTGGTCGCCTTTGCCGCTGTGGAAGGTATCTTCTTCTCCGGCTC 84547 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 ||| ||||||||||||||| | || ||||| || || |||| ||| || ||||| | Sbjct 84546 CTTC-GCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTTACCTTCTCCA 84488 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 ||||||| ||| ||||||||||| |||| |||||| || || || || Sbjct 84487 ACGAACTTATCTCCCGGGACGAGGGCATGCACACCGACTTTGCGTGCCTGCT 84436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588331583929565