Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq85 91.5 5e-13
>seq85
Length=245923
Score = 91.5 bits (100), Expect = 5e-13
Identities = 124/172 (72%), Gaps = 1/172 (1%)
Strand=Plus/Minus
Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755
|| ||| | | |||| || ||||| ||||| | || ||||| | || || ||||
Sbjct 84606 CACCTTTGCCCAGCGTCTGGTCGCCTTTGCCGCTGTGGAAGGTATCTTCTTCTCCGGCTC 84547
Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815
||| ||||||||||||||| | || ||||| || || |||| ||| || ||||| |
Sbjct 84546 CTTC-GCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTTACCTTCTCCA 84488
Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
||||||| ||| ||||||||||| |||| |||||| || || || ||
Sbjct 84487 ACGAACTTATCTCCCGGGACGAGGGCATGCACACCGACTTTGCGTGCCTGCT 84436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588331583929565
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |