Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq154 125 4e-24
>seq154
Length=71981
Score = 125 bits (138), Expect = 4e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||| | ||| || | ||||| || || || |||||||| |||||||| ||||| ||
Sbjct 41701 GCCGCCCCGAAGTCGGAGAACCAAGTGCAGTGTACTCTCCTTCTGAATGTTGTAATCAGA 41642
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || |||| || | ||| || |||||||| || | || || || ||||||||
Sbjct 41641 AAGAGTACGACCGTCCTCCAATTGCTTTCCGGCAAAGATCAGTCGTTGCTGATCCGGCGG 41582
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||||| |||| || ||||| |||||| ||
Sbjct 41581 AATACCCTCCTTGTCCTGGATCTTGGACTTTACATTGTCGATAGTGTCAGAGCTCTCAAC 41522
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||| ||| || || || ||||| | || ||||| ||||| ||||||
Sbjct 41521 CTCCAAGGTAATTGTCTTGCCGGTGAGTGTCTTCACGAAAATTTGCATG 41473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314728767638561
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |