Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq123 219 6e-52
>seq123
Length=109856
Score = 219 bits (242), Expect = 6e-52
Identities = 1316/2077 (63%), Gaps = 48/2077 (2%)
Strand=Plus/Minus
Query 75365 TTCTTATCCAACG-TGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACAT 75423
||||| ||||| |||| || || || | || || | | || || |||||||||||
Sbjct 49218 TTCTTGGTCAACGGTGAATTGGATTGGCGCAGAAGCAGCCATGGTTCGAAGATAGTACAT 49159
Query 75424 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACT 75483
||||| || ||||||| |||| || ||| ||||| || | ||| |
Sbjct 49158 GCCAGTCTTGAGACCCATTTTCCAGCCAGCGAAGTGCATAGAAGTGATCTTGCCCATGGT 49099
Query 75484 CGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543
|| || | |||||| |||| |||||| ||||| ||||| || |||| ||||||
Sbjct 49098 TGGTTCCTTCAGATGAATGTTCAACGACTGTGACTGATCAATGAAGGCACCTCGATCAGC 49039
Query 75544 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 75603
||||| | || || || | |||| || ||||| | ||| ||| | | | ||||||
Sbjct 49038 GGCCATCTGGATGATAGTTCTCTGAGAGATCTCCCAGACAGTCTTGTAGAGTGCTTTGAT 48979
Query 75604 ATCATCTGGAAGATTTG-TA--TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTT 75660
|| ||||| |||| || || ||||| || ||||| || | || ||| | |||||
Sbjct 48978 GTCGGTTGGAATGTTTGGTACGTTCTGAATTGAACCGCCCTCGGCAATGATTCTGTTCTT 48919
Query 75661 GATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAAT 75720
|| | || ||||| || | | || | || || ||||| || |
Sbjct 48918 CATGTTGTCCGACCACAGGCCAAGATCAACGAGATCTTTGAGCAGCCATGGATTGACGAC 48859
Query 75721 TTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGA 75780
|||||||| || | || || | || | ||| || || |||||||| || | |
Sbjct 48858 CTGAAATTCGCCTGCTAACACACGACGGGAGTAGATGTTGGATGTATATGGCTCGAAGCA 48799
Query 75781 TTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACT 75840
|||||| || ||||| || || | || || || |||||||| ||||| || | | |
Sbjct 48798 TTCATTATTGCCCAATATCTGCGACGTAGAGGCGGTCGGCATGGGTGCGACAAGAAGAGA 48739
Query 75841 ATTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTG 75899
||||| | ||||| || | || || |||| | | ||| |||||||| ||||
Sbjct 48738 ATTTCGAACACCATACTGAGCA-ATCTTGGCTTTCAAGGCCTCCCAGTCCCAAAGGTCTG 48680
Query 75900 ATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATG----ATCCA 75955
|||| | | ||||||| ||||| ||||| || ||| || | ||| | ||
Sbjct 48679 TTGGTGTCAGACCCCAGAGGTCGTACTGTAGCTGACC-TTG--AGAA-ATGGGCGAGCCC 48624
Query 75956 TTATATGTTTCGTAAGTCCC--GTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCAC 76013
| ||| |||||||| | || || | || || || || || || | ||
Sbjct 48623 TCATAGGTTTCGTATGGACCAAGTTCCTTC--GCAAGGTCACATGAAGCTGTCAGAGCTG 48566
Query 76014 CGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAG 76073
||| || || || ||||| || | | || || | | ||||| || ||| || |
Sbjct 48565 CGTGGTAGATAGTCTCGAATATTTGAATGTTGAGCTGTCTTGCTTCGGGAGAATCGAACG 48506
Query 76074 GATAATGTAAAAG-AATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTA 76132
| | | ||| | || || ||||| || || || ||||| |||| |||||| ||||
Sbjct 48505 GC-AGTCTAAGGGCAAGGAAAGCATCAGCAAGGCCTTGAACACCAAGACCAATGGGTCGG 48447
Query 76133 TGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTA 76192
||||| ||| || ||||| || | ||||| || || || || || || ||
Sbjct 48446 TGTCTGAAGTTGCTCTTTCTCGCTTCCGGGACGGGGTAGTAGTTGATCTCGATGATCTTG 48387
Query 76193 TTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCA 76252
|| || || | | || | | || || | ||| | ||| ||| ||| ||
Sbjct 48386 TTCAGGTTCTTAGTCATGACCTGGATGACCTCGTGCAGTCGGCCAAAGTCATATTGACCT 48327
Query 76253 TCTA-----TCAC--AAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTC 76305
|| | ||| ||| || || ||| | ||| || | ||| || ||||| |||||
Sbjct 48326 TCGACTTGGTCAACGAAAGATGGCAA-AGCAACAGAAGCCAAATTGCAGACGGCGACCTC 48268
Query 76306 ATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAG 76365
| || || || | || || || ||||| | || ||||||| || || |
Sbjct 48267 GTCAGGGGCGGTGTACTCAATGATTTCTGTGCACAAGTTGGAGGACTTGATGGTGCCCAA 48208
Query 76366 ATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGT 76425
|| | || || || ||| |||| || | |||||| || || | || || |||||||
Sbjct 48207 GTTCTTCTGATTACTTTTTCTGTTGCAGGCGTCCTTGTAGAGCATGAATGGGTTTCCAGT 48148
Query 76426 TTCAATCTGTGATTCGATAATAGATTTCCAGA-CGACTCTAGCTTTTATTATAGATTTGT 76484
||| |||| | || | || | | ||| | | || | || || ||| | | |
Sbjct 48147 CTCAGTCTGGGCCTCCAAGATGGCATACCACAACTTCTGT-GCCTTGATTGTCTGTCGGC 48089
Query 76485 ATCG--CTTCTCTCTTTCATA-TTGT-GTATATAACCGTTCAAATTCATCTCCCCAAACA 76540
||| |||| ||| |||| || | | | | | || || || || || || |
Sbjct 48088 CTCGGCCTTCCTTCT--CATACTTCTCGAACAGAGCC--TCGAACTCCTCACCGTAGCAG 48033
Query 76541 TCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACC 76600
||| ||||| ||| ||| || || || | | | ||| || || | || || ||||
Sbjct 48032 TCAGATAAACCTGGAGCTTCGTTGGGGCAGAAGAGAGTCCAGTCTCCGTTTTTCTCAACC 47973
Query 76601 CGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCT 76660
|| ||||| || ||||| || |||| ||||| ||| | ||| || | | | ||||
Sbjct 47972 CGCTTCATGAACAGATCTGGAGTCCAGAGAGCGTAAAACAAATCACGAGCACGAACTTCT 47913
Query 76661 TCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCT 76720
|| ||||| ||||| || | || |||| | | ||| | ||||| || ||
Sbjct 47912 TCCTTTCCGTGGTTCTTCCGGAGGTTCAGCCACTCAAAGACATCGGCGTGCCAGGGCTCA 47853
Query 76721 AGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTG 76780
|| || | || | |||| |||| || || || ||||| || | |||| |||||
Sbjct 47852 AGGTAAACGGCAAAGGCACCAGGTCTCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTA 47793
Query 76781 TTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATA 76840
|| | | | |||| | ||| || | || |||||| ||||| || ||||| || | |||
Sbjct 47792 TTGTCAAAGACTCGGAGCATAGGGACAAGGCCGTTTGATGTGCCGTTTGTGCCTGCGATA 47733
Query 76841 TAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAG 76900
|| ||| || ||||| || | | || || || || || | || |||
Sbjct 47732 TAGGAGCCAGTCGCTCGAATTTTGTGGACGTTCAATCCAATACCGCCGGCATTCTTTGAG 47673
Query 76901 ATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTA 76960
|| | || ||| || | || || ||||| ||||| || || ||| ||||||
Sbjct 47672 ATCATGGCGCAGGTCTTTAGCGTATCGTAGATTCCCTCGATCGAGTCCTCCTTCATGTCG 47613
Query 76961 AGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGAT 77020
| | ||||| ||||||||| || || |||||||| || | || || ||
Sbjct 47612 ATCAAGAAACATGATGACATTTGAGCATTTGGTGTGCCTGCATTGAAGAGGGTGGGCGAA 47553
Query 77021 GCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCT--ATAT 77078
|| || |||||| || | || | ||||||||||| ||||| || ||||| ||||
Sbjct 47552 GCGTGTGTGAACATCTTCTGGGACATGAGATTGTATGTCTCAATGAC--CTTCTCGATAT 47495
Query 77079 CCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCT 77138
| | |||||| || |||| || ||||||| ||| ||||| |||| ||| | ||
Sbjct 47494 CTTCTCCATGAATGCCAACAGACACGCGCATCAGCATGTGCTGTGGTCTTTCCCATGGCT 47435
Query 77139 TATTATTTATTTTCAACAAG-TATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 77197
| || | || || | ||| |||||| |||||| || || || ||||||||||||||
Sbjct 47434 TCTT-GTCATATTTGAGAAGATATGATCTTTCCAGTGTCTTGAAGCCAAAATAGTTGTAG 47376
Query 77198 GAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATA 77257
||| |||| ||||| | ||| | || || || | ||| | | | || | |
Sbjct 47375 TTAAAATCTCGGTCGTATACAATGGCAGAGTTGAGCTCGTCGGCGTGCCTCATCAC-ACA 47317
Query 77258 TCCATGACAGT-GGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTT 77316
||| | | | || || || || || | ||||||| || ||||| ||||||||
Sbjct 47316 GTCATAAGTCTCCTTGGAGATCATCGGCGAGTGCCTTCCATTCTTGGGATTGACATAGTT 47257
Query 77317 AAATAAGTCTTCCATTAC-GTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATA 77375
| | |||| || || | || || | | || || || | |||||| |||||||| |
Sbjct 47256 GTAGAGGTCTGTGATGACTGCCGAGAACT-GCTTCTTCGTCTGCTTGTGAAGATTCGAGA 47198
Query 77376 CGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412
| || || | ||||| || || || || || |||||
Sbjct 47197 CTGCGATGCGGGCAGCGAGGATGGCGTAATCTGGATG 47161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712932466165440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |