Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq154 120 7e-22
>seq154
Length=71981
Score = 120 bits (132), Expect = 7e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| || ||||| || || ||||||||||| || ||||||||||| | || |||| ||
Sbjct 41461 TCTCAGCACAAGGTGCAGTGTAGACTCTTTCTGAATGTTGTAATCTGACAAGGTTCGACC 41402
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
||| || || ||| || |||||||| | || ||||||||| | | || ||||||||
Sbjct 41401 ATCCTCCAGCTGTTTGCCTGCGAAGATCAACCGCTGCTGGTCTGGTGGAATACCTTCCTT 41342
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
||||| ||||| || || | || | | | || || || ||||| || || ||
Sbjct 41341 GTCTTGGATTTTCGACTTAACGTTATCGATGGTATCAGATGATTCCACTTCGAGTGTTAT 41282
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||||||| |||||||| || || || | |||||
Sbjct 41281 GGTTTTGCCTGTGAGAGTTTTGACAAAAATTTGCAT 41246
Score = 89.7 bits (98), Expect = 1e-12
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||| ||| || | || || ||| ||| || || ||||||||||| | | ||| |
Sbjct 41691 AGTCGGAGAACCAAGTGCAGTGTACTCTCCTTCTGAATGTTGTAATCAGAAAGAGTACGA 41632
Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004
|| || || | ||||| ||||| ||||| || | ||||| |||| || || || |
Sbjct 41631 CCGTCCTCCAATTGCTTT--CCGGCAAAGATCAGTCGTTGCTGATCCGGCGGAATACCCT 41574
Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064
|||| || || || || || ||| | || | |||| || ||||| || || | |
Sbjct 41573 CCTTGTCCTGGATCTTGGACTTTACATTGTCGATAGTGTCAGAGCTCTCAACCTCCAAGG 41514
Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| || ||||| ||||| ||||||||||| | |||||
Sbjct 41513 TAATTGTCTTGCCGGTGAGTGTCTTCACGAAAATTTGCAT 41474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153817592017607
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |