Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq154 129 4e-25
seq102 96.9 2e-15
>seq154
Length=71981
Score = 129 bits (142), Expect = 4e-25
Identities = 157/212 (74%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || || |||||||| || ||||||||||| | || || |||| |||
Sbjct 41682 ACCAAGTGCAGTGTACTCTCCTTCTGAATGTTGTAATCAGAAAGAGTACGACCGTCCTCC 41623
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
| ||||| ||||||||||||| || |||||||| | || | ||| ||||| |||
Sbjct 41622 AATTGCTTTCCGGCAAAGATCAGTCGTTGCTGATCCGGCGGAATACCCTCCTTGTCCTGG 41563
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | || ||||| | | || ||||||| ||||| ||||
Sbjct 41562 ATCTTGGACTTTACATTGT--CGATAGTGTCAGAGCTCTCAACCTCCAAGGTAATTGTCT 41505
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| || ||||| ||||||||||| |||||||||
Sbjct 41504 TGCCGGTGAGTGTCTTCACGAAAATTTGCATG 41473
Score = 116 bits (128), Expect = 3e-21
Identities = 171/237 (72%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || |||| || ||||| ||| ||||| || || ||| || || ||||||||
Sbjct 41479 TTGCATGCCACCTCGCAATCTCAGCACAAGGTGCAGTGTAGACTCTTTCTGAATGTTGTA 41420
Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
||| | | || | || | || |||||||| || || || |||||||| |||||||| |
Sbjct 41419 ATCTGACAAGGT-TCGACCATCCTCCAGCTGTTTGCCTGCGAAGATCAACCGCTGCTGGT 41361
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCG 44281
||| || | ||||||||| || || ||| ||| || ||| | ||||| || |
Sbjct 41360 CTGGTGGAATACCTTCCTTGTCTTGGATTTTCGACTT-AACGTTATCGATGGTATCAGAT 41302
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||||||| || | || || || || || ||||| || || || || |||||||||
Sbjct 41301 GATTCCACTTCGAGTGTTATGGTTTTGCCTGTGAGAGTTTTGACAAAAATTTGCATG 41245
>seq102
Length=189570
Score = 96.9 bits (106), Expect = 2e-15
Identities = 133/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
||||||| |||||||| || | ||| || | || ||||||||||| || || || |
Sbjct 7822 CCTTTTGAATGTTGTAGTCAGAGAGAGTTCGGCCATCTTCCAGCTGCTTTCCCGCGAAAA 7763
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
|||| || ||||| |||| || | ||| ||||| || ||||| ||| || |||
Sbjct 7762 TCAATCGTTGCTGGTCTGGCGGGATACCCTCCTTGACCTGGATCTTGCTCTTGACATTGT 7703
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||| | ||| || ||||| | || || ||||| ||||| |||||||| ||
Sbjct 7702 --CGATTGTGTCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTTAC 7645
Query 44326 GAAG 44329
||||
Sbjct 7644 GAAG 7641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989447937889
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |