Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq236 147 5e-30
>seq236
Length=225512
Score = 147 bits (162), Expect = 5e-30
Identities = 314/465 (68%), Gaps = 8/465 (2%)
Strand=Plus/Minus
Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232
||||| ||||||| || |||| | |||||| ||||| | || || || |||
Sbjct 196943 TTTGCTCAGCGTCTTGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGTGCTTTT 196884
Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292
| |||||||||||||||| || ||| ||||||| || | | | || ||||||
Sbjct 196883 GCCTCCATCTTTTGGCTGCGCAAGCGTGGTATGATGCCCGGTTTGACTTTCTCCAACGAG 196824
Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTC 230352
| ||| ||| || |||||||| || | || | | ||| | | || | ||
Sbjct 196823 CTTATCTCTCGTGATGAGGGTCTTCACACGGACTTTGCCTGCCTTCTTTTCTCTCACCT- 196765
Query 230353 CAGAACAAGCTACCATTCGAGACGGTCAAACAA---ATCATTACAGAAGCAGTTGAAAAC 230409
|||||| | || | || | | | || ||||| || || || || | |
Sbjct 196764 --GAACAACCGCCCCAGCAAGCAGTTGATCCAGGACATCATCACTGATGCCGTCGTCATT 196707
Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACT 230468
|| ||||||||| || || ||| |||| || ||| ||| | || ||||| ||||| ||
Sbjct 196706 GAGAAGGAGTTCCTTACCGAGGCTCTTCCCTG-CGCTCTTCTCGGTATGAATGCTGACCT 196648
Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528
||| | |||||||| ||||| |||||||| || | || || || ||| |||| ||
Sbjct 196647 CATGAAAACCTACATCGAGTTCGTCGCCGACCGTCTTCTGGTCGCTCTCGGTAACGACAA 196588
Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588
|||||||| | | |||||||| | || |||||| ||| || ||| || |||||
Sbjct 196587 GGTGTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGAAAGAC 196528
Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633
|||||||||||| |||||||| ||| || || | | |||||||
Sbjct 196527 CAACTTCTTCGAGAAGCGTGTTGCTGATTACCAAAAGGCTGGTGT 196483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057817928090240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |