Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq236 147 5e-30 >seq236 Length=225512 Score = 147 bits (162), Expect = 5e-30 Identities = 314/465 (68%), Gaps = 8/465 (2%) Strand=Plus/Minus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 ||||| ||||||| || |||| | |||||| ||||| | || || || ||| Sbjct 196943 TTTGCTCAGCGTCTTGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGTGCTTTT 196884 Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292 | |||||||||||||||| || ||| ||||||| || | | | || |||||| Sbjct 196883 GCCTCCATCTTTTGGCTGCGCAAGCGTGGTATGATGCCCGGTTTGACTTTCTCCAACGAG 196824 Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTC 230352 | ||| ||| || |||||||| || | || | | ||| | | || | || Sbjct 196823 CTTATCTCTCGTGATGAGGGTCTTCACACGGACTTTGCCTGCCTTCTTTTCTCTCACCT- 196765 Query 230353 CAGAACAAGCTACCATTCGAGACGGTCAAACAA---ATCATTACAGAAGCAGTTGAAAAC 230409 |||||| | || | || | | | || ||||| || || || || | | Sbjct 196764 --GAACAACCGCCCCAGCAAGCAGTTGATCCAGGACATCATCACTGATGCCGTCGTCATT 196707 Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACT 230468 || ||||||||| || || ||| |||| || ||| ||| | || ||||| ||||| || Sbjct 196706 GAGAAGGAGTTCCTTACCGAGGCTCTTCCCTG-CGCTCTTCTCGGTATGAATGCTGACCT 196648 Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528 ||| | |||||||| ||||| |||||||| || | || || || ||| |||| || Sbjct 196647 CATGAAAACCTACATCGAGTTCGTCGCCGACCGTCTTCTGGTCGCTCTCGGTAACGACAA 196588 Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588 |||||||| | | |||||||| | || |||||| ||| || ||| || ||||| Sbjct 196587 GGTGTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGAAAGAC 196528 Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 |||||||||||| |||||||| ||| || || | | ||||||| Sbjct 196527 CAACTTCTTCGAGAAGCGTGTTGCTGATTACCAAAAGGCTGGTGT 196483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057817928090240