Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq405 183 4e-41
>seq405
Length=464752
Score = 183 bits (202), Expect = 4e-41
Identities = 632/974 (65%), Gaps = 24/974 (2%)
Strand=Plus/Minus
Query 53711 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCA 53769
|| |||| || || || || ||||||| || | | ||| || | || |||||||||||
Sbjct 119402 GACGCCAAGTTGCACACAGCGACCTCATCAGGAGC-GCAGTACTCGATAATCTCAGTGCA 119344
Query 53770 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 53829
||| || || |||||||| | || | || |||||||| ||| || |||
Sbjct 119343 AAGGTTGGAACTGCGAATGGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGATC 119284
Query 53830 CTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGAC 53889
||| || | ||||| || ||||||| ||| |||| | ||| | ||| || | ||| |
Sbjct 119283 CTTGTACAACATGAAAGGGTTACCAGTCTCAGTCTGAGCTTCCAGAATAGCATACCACAG 119224
Query 53890 GACACGAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTTTCGTA--TAGTGTATACAA 53946
||||||| || || || | || || | | ||||| | |||| | |
Sbjct 119223 CTTCTGAGCCTTGATGGTAAGACGGCCACGTCCTTCC-CGCTCGTACTTGATGTAGAGAG 119165
Query 53947 TCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAA 54006
| ||||| || || || | || | || ||||| || || | || ||||| |
Sbjct 119164 CC--TCAAATTCCTCACCGTAGCAATCAGCTAAGCCAGGGCACTCGTTGGGGCACATGAG 119107
Query 54007 CGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 54066
| ||| || |||| | || || || ||||| || | ||| || ||||| || || |
Sbjct 119106 GGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAACAAATCGGGGATCCACAGGGCAAG 119047
Query 54067 AAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 54126
|| | ||| | || | | ||||| || || ||||| || || |||||| |
Sbjct 119046 GAACAAATCGCGGGCGCGAATCTCCTCCTTACCGTGGTTCTTCCGGAGGTCAAGGAACTC 118987
Query 54127 CATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCC 54186
| | ||||| |||||||| |||| ||| |||| | | | ||||| || ||||| ||
Sbjct 118986 AAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGACGCTTGTTACC 118927
Query 54187 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 54246
|||||||| | ||| | ||| ||||| || | || | || ||| |||| ||| || ||
Sbjct 118926 ACCCTGATCGACGTAACGAGCAGTGTTGTTGAAGACACGCAGCATAGGAACAATGCCGTT 118867
Query 54247 GGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT--TACTAATTGAT 54304
|| | ||| ||||| |||| || ||| ||| | ||||| ||| | ||||
Sbjct 118866 CGAGGTACCGTTGGTGCCGGCAATGTAGGAACCAGTAGCACGGATACGGTGGGCGTTGA- 118808
Query 54305 AGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 54364
|||| || || || ||||| || ||||| | || || || | |||||||||||
Sbjct 118807 -GACCGATACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATCATAGATA 118749
Query 54365 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 54424
|| || ||||| || ||| |||||| | | || ||| ||| | || | ||
Sbjct 118748 CCTTCGATACTGTCTTCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGAGGCTGAGGG 118689
Query 54425 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 54484
|| || || || || | ||||||||| ||||| || || | || || | || |||
Sbjct 118688 GTACCGGCGTTGAAGAGGGTAGGAGAGGCGTGAGTGAAGAACTTGCTCGACATGAGGTTG 118629
Query 54485 TACGTCTCGATA----GCT-GAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGC 54538
|| || || | | ||| | ||| | |||| ||| || || || ||||||
Sbjct 118628 TAAGTTTCCAGAACACGCTCAACATTATCACCCCA------AATACCGACAGCAACACGC 118575
Query 54539 ATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTT 54598
|| | |||||||||||| | || || |||||| | | || || | ||| ||| |
Sbjct 118574 ATAATCATGTGCTGAGGACGCTCGACAATCTTGCCATCAAGCTTGAGAAGGTAAGATCTC 118515
Query 54599 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAG 54658
||||| || || || ||||| || | ||| ||||| || || || | ||| | |||
Sbjct 118514 TCCAAGGTCTTGAATCCAAAGTACTGGTAGTTGAAGTCGCGGTCATATACAATGGCCGAG 118455
Query 54659 TTGAGTTTATCCTT 54672
| || | |||||
Sbjct 118454 TCCAGCTCTTCCTT 118441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593718275159040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |