Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq191 134 9e-27
seq419 98.7 6e-16
seq438 91.5 1e-13
>seq191
Length=257482
Score = 134 bits (148), Expect = 9e-27
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | ||| || ||||| ||||||||||| ||||| |||| ||||
Sbjct 142966 AGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCC 143025
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| |||||| || || || || || ||||||||||| ||| | || |||||||||
Sbjct 143026 TCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 143085
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | ||| | || ||||| || | ||||||||
Sbjct 143086 TGGATCTTGCTCTTGACGTTGTCGATGGTATCAGAAGACTCGACCTCAAGAGTGATGGTC 143145
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| ||||| ||||| |||||||||||
Sbjct 143146 TTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 143177
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| || || |||| | || || | |||||| || ||||||
Sbjct 143215 TCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAA 143274
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || ||||||||||| ||| | | ||||||||| ||||| ||| | || |
Sbjct 143275 ATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACATTG 143334
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||| | ||| ||||| || | || ||||| |||||||| || || || ||
Sbjct 143335 TCGATAGTATCCGACGACTCGACCTCAAGGGTAATGGTCTTGCCGGTCAGGGTCTTGACG 143394
Query 34379 AAGATCTGCAT 34389
|| ||||||||
Sbjct 143395 AAAATCTGCAT 143405
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || ||||| | |||| || ||||| |||||||||||||| || |||| | ||
Sbjct 143422 AGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGGCCATCC 143481
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||| || || || || || ||||| ||||| ||| | || |||||||||
Sbjct 143482 TCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCC 143541
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | || | || || || || | ||||||||
Sbjct 143542 TGAATCTTCGACTTGACGTTGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTGATGGTC 143601
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| || ||||| || ||||||||||||||
Sbjct 143602 TTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 143633
Score = 98.7 bits (108), Expect = 6e-16
Identities = 123/169 (73%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| |||||||| ||||| || ||| | || || | ||||||||| ||||||
Sbjct 143671 TCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAA 143730
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || ||||||||||| ||| | | ||||||||| ||||| ||| | || |
Sbjct 143731 ATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTG 143790
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGA 34367
| || | ||||| || || || || | |||||||| ||||||||||
Sbjct 143791 TCAATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGA 143839
>seq419
Length=149002
Score = 98.7 bits (108), Expect = 6e-16
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261
||||| ||||||||||| || || ||| | || |||| ||||||||| ||||| ||
Sbjct 86403 TTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 86462
Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321
|| ||||||||||| ||| | || ||||||||| ||||| ||| | | | |
Sbjct 86463 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 86522
Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381
|||| || | || ||||| || | ||||| || || || || || || || || ||
Sbjct 86523 ATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTAACGAAA 86582
Query 34382 ATCTGCATC 34390
|||||||||
Sbjct 86583 ATCTGCATC 86591
>seq438
Length=409217
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | ||| || ||||| ||||||||||| ||||| ||| | ||
Sbjct 73264 AGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCC 73323
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| ||||| || || ||||||||||| ||| | | |||||||||
Sbjct 73324 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 73383
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | || | || ||||| |||| ||||||||
Sbjct 73384 TGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACCTCCAGGGTGATGGTC 73443
Query 34358 TTGCCGGTGAGAGTTTTCACAAA 34380
|| || || || || || || ||
Sbjct 73444 TTACCCGTCAGGGTCTTGACGAA 73466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323070236026880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |