Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq214 91.5 3e-13
seq236 89.7 1e-12
>seq214
Length=241655
Score = 91.5 bits (100), Expect = 3e-13
Identities = 157/227 (69%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACC 35455
|| ||||| ||||||||||| || ||||| |||||||| |||||||||||||| | |
Sbjct 61327 GGCGATTTAGGACCCGTATATGGGTTCCAGTGGCGTCACTTTGGTGCTGAATACG---TC 61271
Query 35456 TGTTCT---TCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACC 35512
|||| | |||||||| ||| |||| | || || ||||| | | | ||
Sbjct 61270 GATTCTAAGACGGATTATACAGGACAGGGCGTCGACCAGTTGGCTGAGGTTATTCGGAAA 61211
Query 35513 CTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTT 35572
| |||| || || ||| ||| |||| || | | |||||||| || || ||
Sbjct 61210 TTACGAGAGAACCCGTTTGACAGACGGATTATCCTAAGCGCATGGAACCCCGCCGACCTG 61151
Query 35573 CACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
| ||||||||||| |||||||||||| ||| ||||| || ||
Sbjct 61150 AAGAAAATGGCTCTTCCACCATGCCACATGTTTGCCCAATTCTACGT 61104
>seq236
Length=225512
Score = 89.7 bits (98), Expect = 1e-12
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975
||||||||||||| || ||||| || |||||||| |||||| || || ||||| || |
Sbjct 196930 TTGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGTGCTTTTGCCTCCATCTTTT 196871
Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035
|| | || | ||||| |||| ||| | || | |||||| ||| | || ||| | |
Sbjct 196870 GGCTGCGCAAGCGTGGTATGATGCCCGGTTTGACTTTCTCCAACGAGCTTATCTCTCGTG 196811
Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
| || |||||||| |||||||| ||| | || ||
Sbjct 196810 ATGAGGGTCTTCACACGGACTTTGCCTGCCTTCTTTT 196774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989578319787840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |