Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq214 91.5 3e-13 seq236 89.7 1e-12 >seq214 Length=241655 Score = 91.5 bits (100), Expect = 3e-13 Identities = 157/227 (69%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACC 35455 || ||||| ||||||||||| || ||||| |||||||| |||||||||||||| | | Sbjct 61327 GGCGATTTAGGACCCGTATATGGGTTCCAGTGGCGTCACTTTGGTGCTGAATACG---TC 61271 Query 35456 TGTTCT---TCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACC 35512 |||| | |||||||| ||| |||| | || || ||||| | | | || Sbjct 61270 GATTCTAAGACGGATTATACAGGACAGGGCGTCGACCAGTTGGCTGAGGTTATTCGGAAA 61211 Query 35513 CTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTT 35572 | |||| || || ||| ||| |||| || | | |||||||| || || || Sbjct 61210 TTACGAGAGAACCCGTTTGACAGACGGATTATCCTAAGCGCATGGAACCCCGCCGACCTG 61151 Query 35573 CACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 | ||||||||||| |||||||||||| ||| ||||| || || Sbjct 61150 AAGAAAATGGCTCTTCCACCATGCCACATGTTTGCCCAATTCTACGT 61104 >seq236 Length=225512 Score = 89.7 bits (98), Expect = 1e-12 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 ||||||||||||| || ||||| || |||||||| |||||| || || ||||| || | Sbjct 196930 TTGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGTGCTTTTGCCTCCATCTTTT 196871 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || | || | ||||| |||| ||| | || | |||||| ||| | || ||| | | Sbjct 196870 GGCTGCGCAAGCGTGGTATGATGCCCGGTTTGACTTTCTCCAACGAGCTTATCTCTCGTG 196811 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 | || |||||||| |||||||| ||| | || || Sbjct 196810 ATGAGGGTCTTCACACGGACTTTGCCTGCCTTCTTTT 196774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989578319787840