Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq405 197 2e-45
>seq405
Length=464752
Score = 197 bits (218), Expect = 2e-45
Identities = 641/981 (65%), Gaps = 26/981 (3%)
Strand=Plus/Minus
Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTC 65794
|| || || |||| || || || || ||||||| || | | ||| || | || |||||
Sbjct 119408 GCGACCGACGCCAAGTTGCACACAGCGACCTCATCAGGAGC-GCAGTACTCGATAATCTC 119350
Query 65795 AGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 65854
||||||||| || || |||||||| | || | || |||||||| ||| ||
Sbjct 119349 AGTGCAAAGGTTGGAACTGCGAATGGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCA 119290
Query 65855 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 65914
|||||| || | ||||| || ||||||| ||| |||||| ||| | ||| || |
Sbjct 119289 GTGATCCTTGTACAACATGAAAGGGTTACCAGTCTCAGTCTGAGCTTCCAGAATAGCATA 119230
Query 65915 CCAGACGACTC-GAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTTTCGTA--TAGTG 65970
||| | | || ||||||| || || || | || || | | ||||| | ||
Sbjct 119229 CCACA-GCTTCTGAGCCTTGATGGTAAGACGGCCACGTCCTTCC-CGCTCGTACTTGATG 119172
Query 65971 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGAC 66030
|| | | | || || || || || | || | || ||||| || || | || |
Sbjct 119171 TAGAGAGCC--TCAAATTCCTCACCGTAGCAATCAGCTAAGCCAGGGCACTCGTTGGGGC 119114
Query 66031 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 66090
|||| | | ||| || |||| | || || || ||||| || | ||| || ||||| |
Sbjct 119113 ACATGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAACAAATCGGGGATCCACA 119054
Query 66091 GAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 66150
| || | || ||||| | || | | ||||| || || ||||| || || |
Sbjct 119053 GGGCAAGGAACAAATCGCGGGCGCGAATCTCCTCCTTACCGTGGTTCTTCCGGAGGTCAA 118994
Query 66151 GGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 66210
||||| | | | |||| |||||||| |||| ||| ||||| | | | ||||| || |
Sbjct 118993 GGAACTCAAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGACGCT 118934
Query 66211 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 66270
|||| || |||||||| | ||| | ||| ||||| || | || | || ||| |||| ||
Sbjct 118933 TGTTACCACCCTGATCGACGTAACGAGCAGTGTTGTTGAAGACACGCAGCATAGGAACAA 118874
Query 66271 TACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATAT--TACT 66328
| || || || ||||| ||||| |||| || ||| ||| | ||||| ||| |
Sbjct 118873 TGCCGTTCGAGGTACCGTTGGTGCCGGCAATGTAGGAACCAGTAGCACGGATACGGTGGG 118814
Query 66329 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 66388
|||| |||| || || || ||||| || ||||| | || || || | |||||
Sbjct 118813 CGTTGA--GACCGATACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATC 118756
Query 66389 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 66448
|||||| || || ||||| || ||| |||||| | | || ||| ||| | || |
Sbjct 118755 ATAGATACCTTCGATACTGTCTTCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGAGG 118696
Query 66449 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 66508
|| || || || || || | ||||||||| ||||| || || | || || |
Sbjct 118695 CTGAGGGGTACCGGCGTTGAAGAGGGTAGGAGAGGCGTGAGTGAAGAACTTGCTCGACAT 118636
Query 66509 TAGATTGTACGTCTCAATA----GCT-GAGTCTAT-ATCCCATTGATGAATTCCTACTGC 66562
|| ||||| || || | | ||| | ||| | |||| ||| || || ||
Sbjct 118635 GAGGTTGTAAGTTTCCAGAACACGCTCAACATTATCACCCCA------AATACCGACAGC 118582
Query 66563 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 66622
|||||||| | |||||||||||| | || || |||||| | | || | | |||
Sbjct 118581 AACACGCATAATCATGTGCTGAGGACGCTCGACAATCTTGCCATCAAGCTTGAGAAGGTA 118522
Query 66623 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 66682
||| | ||||| || || || ||||| || | ||| ||||| || || || | |||
Sbjct 118521 AGATCTCTCCAAGGTCTTGAATCCAAAGTACTGGTAGTTGAAGTCGCGGTCATATACAAT 118462
Query 66683 AACCGAGTTGAGTTTATCCTT 66703
|||||| || | |||||
Sbjct 118461 GGCCGAGTCCAGCTCTTCCTT 118441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658169114232320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |