Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq236 224 1e-53
seq405 118 2e-21
>seq236
Length=225512
Score = 224 bits (248), Expect = 1e-53
Identities = 575/866 (66%), Gaps = 26/866 (3%)
Strand=Plus/Minus
Query 124999 TTCCC-ATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057
||||| |||| ||| || || || ||| |||||||||| ||||| ||||||| || |||
Sbjct 197360 TTCCCTATCAAGTACCACGAGATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGG 197301
Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117
|| | ||| ||| | ||||| || ||||| || |||| ||| | | || ||||| |
Sbjct 197300 ACCGCCGAGGAGATTGATCTTTCTAAGGATCTTCACGACTGGAATAACCGCATGACTAAG 197241
Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177
||||| || || || ||| || | |||||||| |||| ||| || || || |||
Sbjct 197240 GATGAGCAGTTCTTCATCTCTCACGTTCTTGCCTTCTTCGCCGCCTCTGACGGTATTGTC 197181
Query 125178 AACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTT 125237
||||| || || | || |||||| ||| | || || || | ||||||
Sbjct 197180 AACGAGAACTTGGTCGAGCGTTTCTCTGCTGAGGTCCAGATCCCCGAAGCCCGTTGCTTT 197121
Query 125238 TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGAC 125297
||||| ||||| |||||||| |||||| | |||||||| | |||||| ||||| |||
Sbjct 197120 TACGGTTTCCAGATCATGATGGAGAACATTCACTCGGAGACCTACTCTTTGCTGATCGAC 197061
Query 125298 ATGTACATTCGCGATCCG---CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTG 125354
| |||||| || || || || | | || ||||| ||||| || ||||| |
Sbjct 197060 ACCTACATTAAGGAGCCTGCTCAGCGCACATAC---CTCTTCAACGCCATTGACACTATT 197004
Query 125355 CCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCG 125414
|| | || || ||||| | |||| | |||||| |||| | |||| |
Sbjct 197003 CCCTGCATTCGCCGCAAGGCCGACTGGGCCCTGAAGTGGATTACTGACAAGGAGTCGACT 196944
Query 125415 TACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTT 125474
| || | | || || || || ||||| || ||||| |||||||| || ||| ||||
Sbjct 196943 TTTGCTCAGCGTCTTGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGTGCTTTT 196884
Query 125475 GCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAG 125534
|| ||||||||||||| ||||| || | |||||||| |||| | ||||||
Sbjct 196883 GCCTCCATCTTTTGGCTGCGCAAGCGTGGTATGATGCCCGGTTTGACTTTCTCCAACGAG 196824
Query 125535 TTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT- 125592
|||| ||||| || ||||| || ||| ||||||||| || || || || || ||
Sbjct 196823 CTTATCTCTCGTGATGAGGGTCTTCACACGGACTTTGCCTGCCTTCTTTTCTCTCACCTG 196764
Query 125593 ATCTGCGTCCCGAG--TGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGC 125650
| | | ||| || |||| | ||| ||| ||||| | || |||||
Sbjct 196763 AACAACCGCCCCAGCAAGCAGTT-----GAT--CCAGGACATCA------TCACTGATGC 196717
Query 125651 CGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAA 125710
||| || || | ||||| || ||||| | || || | | | || |||||
Sbjct 196716 CGTCGTCATTGAGAAGGAGTTCCTTACCGAGGCTCTTCCCTGCGCTCTTCTCGGTATGAA 196657
Query 125711 CTGC-AAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGA 125769
||| | || ||| ||||| ||||| || || || ||||| ||| || |
Sbjct 196656 -TGCTGACCTCATGAAAACCTACATCGAGTTCGTCGCCGACCGTCTTCTGGTCGCTCTCG 196598
Query 125770 TTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAG 125829
| | |||| | ||||| |||| || ||||| || |||||| | ||| || || |
Sbjct 196597 GTAACGACAAGGTGTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTG 196538
Query 125830 AGGGTAAGACCAACTTTTTCGAGAAG 125855
|| ||||||||||| |||||||||
Sbjct 196537 GTGGAAAGACCAACTTCTTCGAGAAG 196512
>seq405
Length=464752
Score = 118 bits (130), Expect = 2e-21
Identities = 327/496 (66%), Gaps = 4/496 (1%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| || || || || || || ||| | ||| | ||| |||| || |||||||| ||
Sbjct 118921 CAGGGTGGTAACAAGCGTCCTGGTGCTTTTGCCATTTACCTGGAGCCGTGGCACGCTGAT 118980
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| ||||| || | || | || || ||| || || ||| || ||| | ||
Sbjct 118981 GTGTTTGAGTTCCTTGACCTCCGGAAGAACCACGGTAAGGAGGAGATTCGCGCCCGCGAT 119040
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
||||| ||| || ||| | || ||||||||||||||||| || | | ||| |
Sbjct 119041 TTGTTCCTTGCCCTGTGGATCCCCGATTTGTTCATGAAGCGTGTTGAGAAGAACGGCGAA 119100
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
|||| ||| ||||||||| || || || || | | ||||||| || || || |||
Sbjct 119101 TGGACCCTCATGTGCCCCAACGAGTGCCCTGGCTTAGCTGATTGCTACGGTGAGGAATTT 119160
Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACG 97174
||||| |||| ||||||| || || || ||| || | || | || |
Sbjct 119161 GAGGCTCTCTACATCAAGTACGAGCGGGAAGGACGTGGCCGTCTTACCA-TCAAGGCTC- 119218
Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233
|||| |||||| | || || || |||||| |||||||| | || | ||| | |
Sbjct 119219 AGAAGCTGTGGTATGCTATTCTGGAAGCTCAGACTGAGACTGGTAACCCTTTCATGTTGT 119278
Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293
|||||||| | || ||||| || ||||| || |||| ||||| | ||||
Sbjct 119279 ACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAACCTGGGAACCATTCGCAGTTCCA 119338
Query 97294 ATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGG 97353
| || ||||| || ||| | |||||| | |||| || ||| || || ||| |||
Sbjct 119339 ACCTTTGCACTGAGATTATCGAGTACTGCGCTCCTGATGAGGTCGCTGTGTGCAACTTGG 119398
Query 97354 CATCGGTCAATCTGCC 97369
| |||||| ||| ||
Sbjct 119399 CGTCGGTCGCTCTCCC 119414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741055050068480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |