Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq191 96.9 3e-15
>seq191
Length=257482
Score = 96.9 bits (106), Expect = 3e-15
Identities = 139/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||| || |||||||| |||| || || ||||||||||||||||||| | |
Sbjct 142986 CTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCAAA 143045
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652
|| | ||||||||| ||| || | | ||||||||| || || ||||| |
Sbjct 143046 GATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTT 143105
Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712
| || |||||||| | |||||| ||| | || ||||| || ||||| ||||| |||
Sbjct 143106 GTCG--ATGGTATCAGAAGACTCGACCTCAAGAGTGATGGTCTTGCCGGTCAGAGTCTTC 143163
Query 48713 ACAAAAATCTGCAT 48726
|| || ||||||||
Sbjct 143164 ACGAAGATCTGCAT 143177
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577
|| || ||||| ||| |||||| || |||||||| || | | || | |||||
Sbjct 143197 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCCATCCTCA 143256
Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637
||||||||||| || |||| | |||||||| ||| || | || |||||||||
Sbjct 143257 AGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 143316
Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697
|| ||| ||| | | | || ||||| | ||||| ||| | || ||||| ||
Sbjct 143317 ATCTTCGACTTAACATTGTCGATAGTATCCGACGACTCGACCTCAAGGGTAATGGTCTTG 143376
Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||||| || || || || |||||||||||
Sbjct 143377 CCGGTCAGGGTCTTGACGAAAATCTGCAT 143405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421248899968448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |