Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq436 172 9e-39
seq130 105 1e-18
>seq436
Length=106554
Score = 172 bits (190), Expect = 9e-39
Identities = 201/269 (75%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||| |||| ||| |||||| || ||||| || || ||||| ||||| || |
Sbjct 45727 CGCTAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACTAAGCCCGCCA 45669
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
| |||||||| |||||||||||||| ||||||||| | |||| || |||| || ||||
Sbjct 45668 TTCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTGCCATGATCTACGAGGAGA 45609
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|||| |||| | |||| |||||| || || || | ||| ||| || ||| || |
Sbjct 45608 CCCGTGGTGTTCTCAAGACCTTCCTTGAGGGTGTCATTCGTGACGCTGTCACCTACACTG 45549
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| |||||||| | || | ||||| || | || | ||||
Sbjct 45548 AGCACGCCAAGCGCAAGACCGTCACCTCTCTCGACGTTGTCTACGCTCTCAAGAGACAAG 45489
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | | || ||||| || |||||
Sbjct 45488 GCCGCACCCTGTACGGTTTCGGTGGTTAA 45460
>seq130
Length=271377
Score = 105 bits (116), Expect = 1e-18
Identities = 86/102 (84%), Gaps = 2/102 (2%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| |||||| || ||||| || || ||||||||||| ||||
Sbjct 217591 CGCCAAGCGTCACCGCAAGAT-TCTTCGCGACAACATTCAGGGTATCACCAAGCCTGCTA 217649
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
| || ||||| |||||||||||||| ||||||||| | ||||
Sbjct 217650 TTCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 217691
Score = 89.7 bits (98), Expect = 8e-14
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| || | |||| | |||| |||||| || || || | ||| |
Sbjct 217761 TGATCTACGAAGAGACCCGCGGTGTTCTCAAGACCTTCCTTGAGGGTGTCATTCGTGACG 217820
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
|| || ||| || |||||||| || || |||||||||||||| | || | ||||| |
Sbjct 217821 CTGTCACCTACACTGAGCACGCCAAGCGCAAGACTGTCACCTCGCTTGACGTTGTCTACG 217880
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || || || ||||||| |||| ||||| || |||||
Sbjct 217881 CTCTCAAGCGCCAGGGCCGTACTCTTTACGGTTTCGGTGGTTAA 217924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074790390464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |