Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq405 188 9e-43
>seq405
Length=464752
Score = 188 bits (208), Expect = 9e-43
Identities = 639/981 (65%), Gaps = 26/981 (3%)
Strand=Plus/Minus
Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTC 62950
|| || || |||| || || || || ||||||| || | | ||| || | || |||||
Sbjct 119408 GCGACCGACGCCAAGTTGCACACAGCGACCTCATCAGGAGC-GCAGTACTCGATAATCTC 119350
Query 62951 AGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 63010
||||||||| || || || ||||| | || | || |||||||| ||| ||
Sbjct 119349 AGTGCAAAGGTTGGAACTGCGAATGGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCA 119290
Query 63011 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 63070
|||||| || | ||||| || ||||||| ||| |||||| ||| | ||| || |
Sbjct 119289 GTGATCCTTGTACAACATGAAAGGGTTACCAGTCTCAGTCTGAGCTTCCAGAATAGCATA 119230
Query 63071 CCAGACGACTC-GAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTTTCGTA--TAGTG 63126
||| | | || ||||||| || || || | ||||| | | ||||| | ||
Sbjct 119229 CCACA-GCTTCTGAGCCTTGATGGTAAGACGGCCACGTCCTTCC-CGCTCGTACTTGATG 119172
Query 63127 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGAC 63186
|| | | | || || || || || | || | || ||||| || || | || |
Sbjct 119171 TAGAGAGCC--TCAAATTCCTCACCGTAGCAATCAGCTAAGCCAGGGCACTCGTTGGGGC 119114
Query 63187 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63246
|||| | | ||| || |||| | || || || ||||| || | ||| || ||||| |
Sbjct 119113 ACATGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAACAAATCGGGGATCCACA 119054
Query 63247 GAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63306
| || | || | ||| | || | | ||||| || || ||||| || || |
Sbjct 119053 GGGCAAGGAACAAATCGCGGGCGCGAATCTCCTCCTTACCGTGGTTCTTCCGGAGGTCAA 118994
Query 63307 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63366
||||| | | | ||||| |||||||| |||| ||| ||||| | | | ||||| || |
Sbjct 118993 GGAACTCAAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGACGCT 118934
Query 63367 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63426
|||| || |||||||| | ||| | ||| ||||| || | || | || ||| |||| ||
Sbjct 118933 TGTTACCACCCTGATCGACGTAACGAGCAGTGTTGTTGAAGACACGCAGCATAGGAACAA 118874
Query 63427 TACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATAT--TACT 63484
| ||||| || |||| ||||| |||| || ||| ||| | ||||| ||| |
Sbjct 118873 TGCCGTTCGAGGTACCGTTGGTGCCGGCAATGTAGGAACCAGTAGCACGGATACGGTGGG 118814
Query 63485 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTC 63544
|||| |||| || || || ||||| || ||||| | || || || | || ||
Sbjct 118813 CGTTGA--GACCGATACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATC 118756
Query 63545 ATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63604
||||||||| || || || || || |||||| | | || ||| ||| | || |
Sbjct 118755 ATAGATACCTTCGATACTGTCTTCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGAGG 118696
Query 63605 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63664
|| || || || || || | ||||||||| ||||| || || | || || |
Sbjct 118695 CTGAGGGGTACCGGCGTTGAAGAGGGTAGGAGAGGCGTGAGTGAAGAACTTGCTCGACAT 118636
Query 63665 TAGATTGTACGTCTCAATA----GCT-GAGTCTAT-ATCCCATTGATGAATTCCTACTGC 63718
|| ||||| || || | | ||| | ||| | |||| ||| || || ||
Sbjct 118635 GAGGTTGTAAGTTTCCAGAACACGCTCAACATTATCACCCCA------AATACCGACAGC 118582
Query 63719 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 63778
|||||||| | |||||||||||| | || || |||||| | | || | | |||
Sbjct 118581 AACACGCATAATCATGTGCTGAGGACGCTCGACAATCTTGCCATCAAGCTTGAGAAGGTA 118522
Query 63779 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838
||| | ||||| || || || ||||| || | ||| ||||| || || || | |||
Sbjct 118521 AGATCTCTCCAAGGTCTTGAATCCAAAGTACTGGTAGTTGAAGTCGCGGTCATATACAAT 118462
Query 63839 AACCGAGTTGAGTTTATCCTT 63859
|||||| || | |||||
Sbjct 118461 GGCCGAGTCCAGCTCTTCCTT 118441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622943711495680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |