Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq405 370 3e-97 seq236 95.1 3e-14 >seq405 Length=464752 Score = 370 bits (410), Expect = 3e-97 Identities = 1180/1799 (66%), Gaps = 58/1799 (3%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGA 363449 || |||| ||||| |||||| ||| ||||| |||| | |||| | ||||| || Sbjct 118495 TTTGGATTCAAGACCTTGGAGAGATCTTACCT-TCTCAAGCTTGATGGCAAGATTGTCGA 118553 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 || || ||||| ||| | |||||||||||| | ||||| ||| ||| || || Sbjct 118554 GCGTCCTCAGCACATGATTATGCGTGTTGCTGTCGGTAT---TTGGGGTGATAATGTTGA 118610 Query 363510 -CGCGATT--GAAACATATAAGCTTCTAA-GTGCTCGTGTATTCACGCACGCCACGCCAA 363565 || | | ||||| || || || | | || || | ||||| |||||| | || | Sbjct 118611 GCGTGTTCTGGAAACTTACAACCTCATGTCGAGCAAGT-TCTTCACTCACGCCTCTCCTA 118669 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | | | ||| || || || | | | || ||| | ||||| ||||| | || | |||| Sbjct 118670 CCCTCTTCAACGCCGGTACCCCTCAGCCTCAGCTTTCTTCCTGCTTCTTGGTAGACATGA 118729 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 |||| || ||||| ||||||| ||| || || |||| |||||| | || ||||||| Sbjct 118730 AGGAAGACAGTATCGAAGGTATCTATGATACCCTCAAGACCTGTGCTATGATCTCCAAGA 118789 Query 363686 ATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTT---ACAT 363740 || || || || ||| | | || |||| | | ||||| || | ||| |||| Sbjct 118790 TGGCGGGTGGTATCGGTCTCAACGC-CCACCGTATCCGTGCTACTG----GTTCCTACAT 118844 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 | |||||| || |||||| || | ||||| ||||| ||||| || |||| || Sbjct 118845 TGCCGGCACCAACGGTACCTCGAACGGCATTGTTCCTATGCTGCGTGTCTTCAACAACAC 118904 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860 ||| | |||||||| |||||||| ||||| || || ||||| || || || || Sbjct 118905 TGCTCGTTACGTCGATCAGGGTGGTAACAAGCGTCCTGGTGCTTTTGCCATTTACCTGGA 118964 Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGA 363920 ||| || || ||| | |||||||| ||||| |||||||| ||| || || ||||| Sbjct 118965 GCCGTGGCACGCTGATGTGTTTGAGTTCCTTGACCTCCGGAAGAACCACGGTAAGGAGGA 119024 Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980 | || || || ||| ||||| ||| || ||| | | || || |||||||| || Sbjct 119025 GATTCGCGCCCGCGATTTGTTCCTTGCCCTGTGGATCCCCGATTTGTTCATGAAGCGTGT 119084 Query 363981 GGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038 ||| | | | | | ||| | ||| | ||||| |||| || || || | | ||| Sbjct 119085 TGAG--AAGAACGGCGAATGGACCCTCATGTGCCCCAACGAGTGCCCTGGCTTAGCTGAT 119142 Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT 364098 | ||||| || | || ||||| ||| ||||| || ||| ||| | ||| Sbjct 119143 TGCTACGGTGAGGAATTTGAGGCTCTCTACATCAAGTACGAGCGGGAAGGACGTGGCCGT 119202 Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 || || || |||||||| |||| ||| || |||| | |||| |||||| || Sbjct 119203 CTTACCATCAAGGCTCAGAAGCTGTGGTATGCTATTCTGGAAGCTCAGACTGAGACTGGT 119262 Query 364159 ACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 | ||||| | ||||||||||| ||| |||||||||||| |||||| || |||| || Sbjct 119263 A-ACCCTTTCATGTTGTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAACCTGGG 119321 Query 364218 TACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGA 364276 || |||| |||| |||||| || || |||||||| || ||| |||||| || ||| Sbjct 119322 AACCATTC-GCAGTTCCAACCTTTGCACTGAGATTATCGAGTACTGCGCTCCTGATGAGG 119380 Query 364277 CTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT----------AAAAGAT 364326 || || || ||| | |||||| |||| || || || | ||| || | | Sbjct 119381 TCGCTGTGTGCAACTTGGCGTCGGTCGCTCTCCCTGCCTATGTTGACTACACCAACAACT 119440 Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGAC 364386 | ||| ||| |||| | || | || || ||| | || | |||| | || Sbjct 119441 GCTAC----GACTTCCAGAAGCTGCACGATGTCACCAAGGTTGTTGTCCGCAACTTGAAC 119496 Query 364387 AAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCAT 364446 | || || ||| | || || || || ||| | || |||||||| Sbjct 119497 CGTATCATTGATGTGAACCACTACCCTGTTGTCGAGGCCCGGAACAGCAACATGCGTCAC 119556 Query 364447 CGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCA 364506 || || |||||| ||||||| ||||| || || || | || || || ||| | Sbjct 119557 CGTCCCATTGGTGTTGGTGTCCAGGGTCTGGCCGATGCCTTCCTGGCCCTTCGCATGCCT 119616 Query 364507 TTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCC 364566 ||||| || | || |||||| || || ||| |||||||||| || || || || Sbjct 119617 TTTGAGTCTGCCGAGGCTCGTCAGCTCAACAAGCAGATCTTTGAGACCATTTACCACGCT 119676 Query 364567 GCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGG 364626 || || ||||| || || | || | || ||||| || || ||||| Sbjct 119677 GCCCTGGAAGCTTCATGCGACATCGCCGCTGTTGAAGGTCCTTACTCGACCTACGAGGGC 119736 Query 364627 TCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGA 364686 || ||| | || ||||| | | ||||| || | ||| ||||||| || || || Sbjct 119737 TCTCCTGTCTCCCAGGGTATCCTTCAGTTCGACATGTGGGATGTCACCCCCAGTGACCTG 119796 Query 364687 TGGAACTGGGATACGCT--ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCG 364744 ||| | ||| | | || | | | | | ||| || | ||| ||||||||| || Sbjct 119797 TGGGATTGGAACTCTCTGAAAGAGC--AGATCAAGCAGAACGGTGTTCGCAACTCGCTGC 119854 Query 364745 TTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCG 364804 || |||||||||||||| || || ||| | ||||| || || |||||||||||||||| Sbjct 119855 TTGTGGCGCCCATGCCCACTGCCTCAACTTCCCAGATTCTGGGTAACAACGAGTGCTTCG 119914 Query 364805 AACCGTTTACA-AGCAATC-TTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGT 364862 | || ||||| ||| | |||| ||||| || | | || || || | ||| || Sbjct 119915 AGCC--TTACACTTCAAACATTTACCAGCGCCGTGTGTTGGCTGGTGAGTTCCAGGTTGT 119972 Query 364863 TAA---TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAA 364919 || | || || || || ||| |||| || |||||| || | |||||| Sbjct 119973 CAACCCTTGGTTGCT--TC-GCGACCTTGTTGACCTTGGTCTGTGGTCGGATAACATGAA 120029 Query 364920 GAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCT 364979 |||| ||||| | | || |||||||| |||||||| || | |||| | || | Sbjct 120030 GAACCGCATCATTTCGGACAACGGTTCTGTTCAGAACATCCCCAGCATTCCCGCGGACAT 120089 Query 364980 GAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGC 365039 ||| || | ||||| || || ||||| ||||| ||| ||| | || | ||||| || Sbjct 120090 CAAGTCTCTGTACAAGACTGTTTGGGAGATTTCTCAGCGTACTGTTGTTCAGATGGCTGC 120149 Query 365040 CGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAAC 365099 || || ||||| ||||| |||| |||||||| ||| | ||||| | ||||| Sbjct 120150 TGACCGTGGTGCCTTTATTGATCAGTCTCAGTCGTTGAACATTCACATGAAGGACCCAAC 120209 Query 365100 CTCCGCCAAGCTTACATCCATGCATTTCTACGGG-TGGAAATCCGGTCTTAAGACAGGT 365157 | | |||| |||| |||||| || | |||| ||||| ||||| ||||| ||| Sbjct 120210 CATGGGCAAGATTACCAGCATGCACTT-TGCGGGTTGGAAGCTTGGTCTCAAGACGGGT 120267 >seq236 Length=225512 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/206 (70%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTTCATTCGCGGAACGTCTT 22497 ||||| || ||||| ||||| ||||| | |||| || | || || | |||||| Sbjct 196988 AAGGCCGACTGGGCCCTGAAGTGGATTACTGACAAGGAGTCGACTTTTGCTCAGCGTCTT 196929 Query 22498 ATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGG 22557 |||| ||||| | ||||| || || ||||| ||||| || ||| | ||||||||| Sbjct 196928 GTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGTGCTTTTGCCTCCATCTTTTGG 196869 Query 22558 CTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGAT 22617 || || |||| || ||||| ||| | || || || || ||| | || || ||| Sbjct 196868 CTGCGCAAGCGTGGTATGATGCCCGGTTTGACTTTCTCCAACGAGCTTATCTCTCGTGAT 196809 Query 22618 GAGGGTCTTCATACCGATTTTGCGTG 22643 ||||||||||| || || ||||| || Sbjct 196808 GAGGGTCTTCACACGGACTTTGCCTG 196783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303346118750336