Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq405 370 3e-97
seq236 95.1 3e-14
>seq405
Length=464752
Score = 370 bits (410), Expect = 3e-97
Identities = 1180/1799 (66%), Gaps = 58/1799 (3%)
Strand=Plus/Plus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGA 363449
|| |||| ||||| |||||| ||| ||||| |||| | |||| | ||||| ||
Sbjct 118495 TTTGGATTCAAGACCTTGGAGAGATCTTACCT-TCTCAAGCTTGATGGCAAGATTGTCGA 118553
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
|| || ||||| ||| | |||||||||||| | ||||| ||| ||| || ||
Sbjct 118554 GCGTCCTCAGCACATGATTATGCGTGTTGCTGTCGGTAT---TTGGGGTGATAATGTTGA 118610
Query 363510 -CGCGATT--GAAACATATAAGCTTCTAA-GTGCTCGTGTATTCACGCACGCCACGCCAA 363565
|| | | ||||| || || || | | || || | ||||| |||||| | || |
Sbjct 118611 GCGTGTTCTGGAAACTTACAACCTCATGTCGAGCAAGT-TCTTCACTCACGCCTCTCCTA 118669
Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625
| | | ||| || || || | | | || ||| | ||||| ||||| | || | ||||
Sbjct 118670 CCCTCTTCAACGCCGGTACCCCTCAGCCTCAGCTTTCTTCCTGCTTCTTGGTAGACATGA 118729
Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685
|||| || ||||| ||||||| ||| || || |||| |||||| | || |||||||
Sbjct 118730 AGGAAGACAGTATCGAAGGTATCTATGATACCCTCAAGACCTGTGCTATGATCTCCAAGA 118789
Query 363686 ATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTT---ACAT 363740
|| || || || ||| | | || |||| | | ||||| || | ||| ||||
Sbjct 118790 TGGCGGGTGGTATCGGTCTCAACGC-CCACCGTATCCGTGCTACTG----GTTCCTACAT 118844
Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800
| |||||| || |||||| || | ||||| ||||| ||||| || |||| ||
Sbjct 118845 TGCCGGCACCAACGGTACCTCGAACGGCATTGTTCCTATGCTGCGTGTCTTCAACAACAC 118904
Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860
||| | |||||||| |||||||| ||||| || || ||||| || || || ||
Sbjct 118905 TGCTCGTTACGTCGATCAGGGTGGTAACAAGCGTCCTGGTGCTTTTGCCATTTACCTGGA 118964
Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGA 363920
||| || || ||| | |||||||| ||||| |||||||| ||| || || |||||
Sbjct 118965 GCCGTGGCACGCTGATGTGTTTGAGTTCCTTGACCTCCGGAAGAACCACGGTAAGGAGGA 119024
Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980
| || || || ||| ||||| ||| || ||| | | || || |||||||| ||
Sbjct 119025 GATTCGCGCCCGCGATTTGTTCCTTGCCCTGTGGATCCCCGATTTGTTCATGAAGCGTGT 119084
Query 363981 GGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038
||| | | | | | ||| | ||| | ||||| |||| || || || | | |||
Sbjct 119085 TGAG--AAGAACGGCGAATGGACCCTCATGTGCCCCAACGAGTGCCCTGGCTTAGCTGAT 119142
Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT 364098
| ||||| || | || ||||| ||| ||||| || ||| ||| | |||
Sbjct 119143 TGCTACGGTGAGGAATTTGAGGCTCTCTACATCAAGTACGAGCGGGAAGGACGTGGCCGT 119202
Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158
|| || || |||||||| |||| ||| || |||| | |||| |||||| ||
Sbjct 119203 CTTACCATCAAGGCTCAGAAGCTGTGGTATGCTATTCTGGAAGCTCAGACTGAGACTGGT 119262
Query 364159 ACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217
| ||||| | ||||||||||| ||| |||||||||||| |||||| || |||| ||
Sbjct 119263 A-ACCCTTTCATGTTGTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAACCTGGG 119321
Query 364218 TACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGA 364276
|| |||| |||| |||||| || || |||||||| || ||| |||||| || |||
Sbjct 119322 AACCATTC-GCAGTTCCAACCTTTGCACTGAGATTATCGAGTACTGCGCTCCTGATGAGG 119380
Query 364277 CTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT----------AAAAGAT 364326
|| || || ||| | |||||| |||| || || || | ||| || | |
Sbjct 119381 TCGCTGTGTGCAACTTGGCGTCGGTCGCTCTCCCTGCCTATGTTGACTACACCAACAACT 119440
Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGAC 364386
| ||| ||| |||| | || | || || ||| | || | |||| | ||
Sbjct 119441 GCTAC----GACTTCCAGAAGCTGCACGATGTCACCAAGGTTGTTGTCCGCAACTTGAAC 119496
Query 364387 AAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCAT 364446
| || || ||| | || || || || ||| | || ||||||||
Sbjct 119497 CGTATCATTGATGTGAACCACTACCCTGTTGTCGAGGCCCGGAACAGCAACATGCGTCAC 119556
Query 364447 CGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCA 364506
|| || |||||| ||||||| ||||| || || || | || || || ||| |
Sbjct 119557 CGTCCCATTGGTGTTGGTGTCCAGGGTCTGGCCGATGCCTTCCTGGCCCTTCGCATGCCT 119616
Query 364507 TTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCC 364566
||||| || | || |||||| || || ||| |||||||||| || || || ||
Sbjct 119617 TTTGAGTCTGCCGAGGCTCGTCAGCTCAACAAGCAGATCTTTGAGACCATTTACCACGCT 119676
Query 364567 GCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGG 364626
|| || ||||| || || | || | || ||||| || || |||||
Sbjct 119677 GCCCTGGAAGCTTCATGCGACATCGCCGCTGTTGAAGGTCCTTACTCGACCTACGAGGGC 119736
Query 364627 TCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGA 364686
|| ||| | || ||||| | | ||||| || | ||| ||||||| || || ||
Sbjct 119737 TCTCCTGTCTCCCAGGGTATCCTTCAGTTCGACATGTGGGATGTCACCCCCAGTGACCTG 119796
Query 364687 TGGAACTGGGATACGCT--ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCG 364744
||| | ||| | | || | | | | | ||| || | ||| ||||||||| ||
Sbjct 119797 TGGGATTGGAACTCTCTGAAAGAGC--AGATCAAGCAGAACGGTGTTCGCAACTCGCTGC 119854
Query 364745 TTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCG 364804
|| |||||||||||||| || || ||| | ||||| || || ||||||||||||||||
Sbjct 119855 TTGTGGCGCCCATGCCCACTGCCTCAACTTCCCAGATTCTGGGTAACAACGAGTGCTTCG 119914
Query 364805 AACCGTTTACA-AGCAATC-TTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGT 364862
| || ||||| ||| | |||| ||||| || | | || || || | ||| ||
Sbjct 119915 AGCC--TTACACTTCAAACATTTACCAGCGCCGTGTGTTGGCTGGTGAGTTCCAGGTTGT 119972
Query 364863 TAA---TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAA 364919
|| | || || || || ||| |||| || |||||| || | ||||||
Sbjct 119973 CAACCCTTGGTTGCT--TC-GCGACCTTGTTGACCTTGGTCTGTGGTCGGATAACATGAA 120029
Query 364920 GAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCT 364979
|||| ||||| | | || |||||||| |||||||| || | |||| | || |
Sbjct 120030 GAACCGCATCATTTCGGACAACGGTTCTGTTCAGAACATCCCCAGCATTCCCGCGGACAT 120089
Query 364980 GAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGC 365039
||| || | ||||| || || ||||| ||||| ||| ||| | || | ||||| ||
Sbjct 120090 CAAGTCTCTGTACAAGACTGTTTGGGAGATTTCTCAGCGTACTGTTGTTCAGATGGCTGC 120149
Query 365040 CGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAAC 365099
|| || ||||| ||||| |||| |||||||| ||| | ||||| | |||||
Sbjct 120150 TGACCGTGGTGCCTTTATTGATCAGTCTCAGTCGTTGAACATTCACATGAAGGACCCAAC 120209
Query 365100 CTCCGCCAAGCTTACATCCATGCATTTCTACGGG-TGGAAATCCGGTCTTAAGACAGGT 365157
| | |||| |||| |||||| || | |||| ||||| ||||| ||||| |||
Sbjct 120210 CATGGGCAAGATTACCAGCATGCACTT-TGCGGGTTGGAAGCTTGGTCTCAAGACGGGT 120267
>seq236
Length=225512
Score = 95.1 bits (104), Expect = 3e-14
Identities = 145/206 (70%), Gaps = 3/206 (1%)
Strand=Plus/Minus
Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTTCATTCGCGGAACGTCTT 22497
||||| || ||||| ||||| ||||| | |||| || | || || | ||||||
Sbjct 196988 AAGGCCGACTGGGCCCTGAAGTGGATTACTGACAAGGAGTCGACTTTTGCTCAGCGTCTT 196929
Query 22498 ATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGG 22557
|||| ||||| | ||||| || || ||||| ||||| || ||| | |||||||||
Sbjct 196928 GTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGTGCTTTTGCCTCCATCTTTTGG 196869
Query 22558 CTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGAT 22617
|| || |||| || ||||| ||| | || || || || ||| | || || |||
Sbjct 196868 CTGCGCAAGCGTGGTATGATGCCCGGTTTGACTTTCTCCAACGAGCTTATCTCTCGTGAT 196809
Query 22618 GAGGGTCTTCATACCGATTTTGCGTG 22643
||||||||||| || || ||||| ||
Sbjct 196808 GAGGGTCTTCACACGGACTTTGCCTG 196783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303346118750336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |