Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq405 172 5e-38
seq191 125 7e-24
seq438 107 2e-18
seq236 102 8e-17
seq419 100 3e-16
>seq405
Length=464752
Score = 172 bits (190), Expect = 5e-38
Identities = 713/1113 (64%), Gaps = 35/1113 (3%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| ||||| ||||| || ||||||||||| ||| || | ||| || ||| | ||
Sbjct 119975 TTGACAACCTGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTTGAAGTGTAAGGC 119916
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| || ||||| || || | || | || ||||||||| ||||||
Sbjct 119915 TCGAAGCACTCGTTGTTACCCAGAATCTGGGAAGTTGAGGCAGTGGGCATGGGCGCCACA 119856
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||| | |||| || |||||| | || || || | |||||||||
Sbjct 119855 AGCAGCGAGTTGCGAACACCGTTCTGCTTGATCTGCTCTTTCAGAGAGTTCCAATCCCAC 119796
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297
|| | | || | || |||||||||||| |||| | || |||| | | | || |
Sbjct 119795 AGGTCACTGGGGGTGACATCCCACATGTCGAACTGAAGGATACCCTGGGAGACAGGAGAG 119736
Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGCG 145357
|| | ||| |||| || | ||||| ||||| || ||||| ||
Sbjct 119735 CCCTCGTAGGTCGAGTAAGGACCTTCAACAGCGGCGATGTCGCATGAAGCTTCCAGGGCA 119676
Query 145358 CCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTAC 145417
|| ||||| ||||| || ||| |||||||| | || || | ||| |
Sbjct 119675 GCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAGCTGACGAGCCTCGGCAGACTCAAAA 119616
Query 145418 GGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGA 145477
|||||||| || | || |||||||| || ||||| | || || || ||||| ||
Sbjct 119615 GGCATGCGAAGGGCCAGGAAGGCATCGGCCAGACCCTGGACACCAACACCAATGGGACGG 119556
Query 145478 TGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTTTA 145537
|| ||||||||| ||| ||| | | ||| || | || || || ||
Sbjct 119555 TGACGCATGTTGCTGTTCCGGGCCTCGACAACAGGGTAGTGGTTCACATCAATGATACGG 119496
Query 145538 TTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTC-AAACCGAGC 145596
|||||||| || || || ||||| || | | ||| ||| | ||||| | | |
Sbjct 119495 TTCAAGTTGCGGACAACAACCTTGGTGACATCGTGCAGCTTCTGGAAGTCGTAGCAGTTG 119436
Query 145597 CTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTC 145656
| || | | | ||| || | || |||| ||||||||| || || || || |||
Sbjct 119435 TTGGTGTA-GTCAACATAGGCAGGGAGAGCGACCGACGCCAAGTTGCACACAGCGACCTC 119377
Query 145657 CTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAG 145716
|| | ||| ||| | | ||||| | ||| | ||| || |||||||||||
Sbjct 119376 ATCAGGAGCGCAGTACTCGATAATCTCAGTGCAAAGGTTGGAACTGCGAATGGTTCCCAG 119317
Query 145717 ATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGT 145776
|| | ||| ||||| || | |||||| |||||||| | |||| | || |||||
Sbjct 119316 GTTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTACAACATGAAAGGGTTACCAGT 119257
Query 145777 CTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGCTGCTGGTA 145836
||| ||| | |||| ||| | || | ||| | ||| || |||||
Sbjct 119256 CTCAGTCTGAGCTTCCAGAATAGCATACCACAGCTTCTGAG------CCT--TGATGGTA 119205
Query 145837 --GCGGCC---CTCTTC---TTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAG 145888
||||| |||| ||||| || ||||||| ||||||| | |||||||
Sbjct 119204 AGACGGCCACGTCCTTCCCGCTCGTACTTGATGTAGAGAGCCTCAAATTCCTCACCGTAG 119145
Query 145889 CAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTG 145948
||||| | | ||| || |||| |||||| ||||| || | |||| ||||||| |
Sbjct 119144 CAATCAGCTAAGCCAGGGCACTCGTTGGGGCACATGAGGGTCCATTCGCCGTTCTTCTCA 119085
Query 145949 ACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAA 146008
|| |||| ||| |||||||| || | |||||| || | ||| ||||| || || |
Sbjct 119084 ACACGCTTCATGAACAAATCGGGGATCCACAGGGCAAGGAACAAATCGCGGGC---GCGA 119028
Query 146009 ---TCCTCAGCACCCATGTTTCGCTTC---AAATTAAGCACACT-ATAGATGTCCGCGTG 146061
||||| ||| ||| |||| | | ||| | ||| | | | || |||||
Sbjct 119027 ATCTCCTCCTTACCGTGGTT---CTTCCGGAGGTCAAGGA-ACTCAAACACATCAGCGTG 118972
Query 146062 CCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGTCCACGTG 146118
|||||| || | || | ||| | || || || ||| |||||||| || ||||
Sbjct 118971 CCACGGCTCCAGGTAAATGGCAAAAGCACCAGGACGCTTGTTACCACCCTGATCGACGTA 118912
Query 146119 ACGTACCATGTTGTTAAAGACGCGCACCATGGG 146151
||| | ||||||| ||||| |||| ||| ||
Sbjct 118911 ACGAGCAGTGTTGTTGAAGACACGCAGCATAGG 118879
>seq191
Length=257482
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || || || | ||| |||||||| || |||||||| ||
Sbjct 143179 CCACCACGAAGACGGAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 143238
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| |||||||| || ||| | || | |||||||||||||| |||
Sbjct 143239 AGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGG 143298
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||| | | || | |||||| | |||||||
Sbjct 143299 ATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATAGTATCCGACGACTCGACC 143358
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||||| ||| || ||||| || || || ||||||||||||||
Sbjct 143359 TCAAGGGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAAATCTGCAT 143405
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| || || | || | ||| |||||||| || |||||||| ||
Sbjct 142950 GCCACCACGGAGACGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGA 143009
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||| || |||||| |||||||| || || |||| | ||||||||||||||| ||
Sbjct 143010 CAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGG 143069
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| ||| || ||||| | || | ||||| | |||||||
Sbjct 143070 AATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTATCAGAAGACTCGAC 143129
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || ||||| ||||| || ||||| ||||||||
Sbjct 143130 CTCAAGAGTGATGGTCTTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 143177
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | || | ||| |||||||| || ||||||||||||
Sbjct 143635 CCACCACGAAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGAG 143694
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| ||| | || | |||||||||||||| ||
Sbjct 143695 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGA 143754
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | ||||||| |||||| |
Sbjct 143755 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTATCGGAGGACTCAACC 143814
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|||| ||| | ||| || |||||
Sbjct 143815 TCGAGGGTGATGGTCTTGCCGGT 143837
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| |||||||| ||||||||||| ||| | ||| || ||||| |||||||| ||
Sbjct 143437 GTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCAAGCTGCTTACCA 143496
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
|| |||| | |||||| |||||||| || || || || ||||| || ||| ||||
Sbjct 143497 GCAAAGATAAGACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTG 143556
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | || || | |||||| | |||| || | ||| || || || |||||
Sbjct 143557 ACGTTGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTGCCAGTCAGAGTC 143616
Query 131218 TTTACGAAAATCTGCAT 131234
|| || || ||||||||
Sbjct 143617 TTGACAAAGATCTGCAT 143633
>seq438
Length=409217
Score = 107 bits (118), Expect = 2e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | || |||||||| || |||||||| || |
Sbjct 73249 CCACCACGGAGACGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAC 73308
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| ||| |||| | |||||||||||||| ||
Sbjct 73309 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 73368
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || || | |||||||
Sbjct 73369 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACC 73428
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAA 131226
|| | ||| | ||| ||||| || || || || ||||||
Sbjct 73429 TCCAGGGTGATGGTCTTACCCGTCAGGGTCTTGACGAAA 73467
>seq236
Length=225512
Score = 102 bits (112), Expect = 8e-17
Identities = 165/232 (71%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 46083 TATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCA---ACAGCAGCAC 46139
||| || ||| | ||| || |||||||||| |||||||||| | ||| || |
Sbjct 197007 TATTCCCTGCATTCGCCGCAAGGCCGACTGGGCCCTGAAGTGGATTACTGACA--AGGAG 196950
Query 46140 CGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGG 46199
||||||| || ||||| | || |||||||| ||| ||||| |||| || |||||
Sbjct 196949 T-CGACTTTTGCTCAGCGTCTTGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGG 196891
Query 46200 CAGTTTTGCCGCCATCTTTTACAT-CAAAACCAAGGGCATCATGCCCGGCCTGACGTTTA 46258
||||||| ||||||||| | | || | || || |||||||| |||| ||
Sbjct 196890 TGCTTTTGCCTCCATCTTTTGGCTGCGCAAGCGTGGT-ATGATGCCCGGTTTGACTTTCT 196832
Query 46259 GCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT 46310
||||||||| || || || || ||||| || || ||||||||||| || ||
Sbjct 196831 CCAACGAGCTTATCTCTCGTGATGAGGGTCTTCACACGGACTTTGCCTGCCT 196780
>seq419
Length=149002
Score = 100 bits (110), Expect = 3e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| || | |||||| ||||| ||||||||||| ||| |||
Sbjct 86401 CCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 86460
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | |||||||||||||| || || || || ||||| ||| || ||||| | |
Sbjct 86461 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 86520
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | ||||||| || | ||| | || ||||| || || || || ||||
Sbjct 86521 CGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTAACGA 86580
Query 131225 AAATCTGCAT 131234
||||||||||
Sbjct 86581 AAATCTGCAT 86590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472010156728320
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