Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq191 100 2e-16
>seq191
Length=257482
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || ||||||||||||| | ||| | | ||||| | ||
Sbjct 143431 TGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCAAGCTGC 143490
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
|| || ||| | ||||| |||||||||||| || | |||||| ||||| ||| | |
Sbjct 143491 TTACCAGCAAAGATAAGACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTC 143550
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||| || | | | | ||||| || ||| || | |||||||| || || |||
Sbjct 143551 GACTTGACGTTGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTGCCAGTC 143610
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
|| || |||||||| ||||||||
Sbjct 143611 AGAGTCTTGACAAAGATCTGCAT 143633
Score = 95.1 bits (104), Expect = 1e-14
Identities = 165/237 (70%), Gaps = 5/237 (2%)
Strand=Plus/Plus
Query 16703 ATTTAC---CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTG 16759
|||||| || || || || | || |||| || || || |||||||| || ||||||
Sbjct 142942 ATTTACTGGCCACCACGGAGACGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTG 143001
Query 16760 TAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGG 16819
||||| | || ||| | ||||||||| || || || ||| | ||||| ||||| |||
Sbjct 143002 TAGTCAGACAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGG 143061
Query 16820 TCCACAGGCACGCCCTCTTTGT-CGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCC 16878
||| || | |||||| |||| | | | ||||| ||| || | | | | || ||
Sbjct 143062 TCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCT-CTTGACGTTGTCGATGGTATCAGA 143120
Query 16879 GGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
| ||| || | |||||||| || |||||||| || || || || ||||||||
Sbjct 143121 AGACTCGACCTCAAGAGTGATGGTCTTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 143177
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405085788219520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |