Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq405 192 7e-44
>seq405
Length=464752
Score = 192 bits (212), Expect = 7e-44
Identities = 640/981 (65%), Gaps = 26/981 (3%)
Strand=Plus/Minus
Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTC 62805
|| || || |||| || || || || ||||||| || | | ||| || | || |||||
Sbjct 119408 GCGACCGACGCCAAGTTGCACACAGCGACCTCATCAGGAGC-GCAGTACTCGATAATCTC 119350
Query 62806 AGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 62865
||||||||| || || |||||||| | || | || |||||||| ||| ||
Sbjct 119349 AGTGCAAAGGTTGGAACTGCGAATGGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCA 119290
Query 62866 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 62925
|||||| || | ||||| || ||||||| ||| |||||| ||| | ||| || |
Sbjct 119289 GTGATCCTTGTACAACATGAAAGGGTTACCAGTCTCAGTCTGAGCTTCCAGAATAGCATA 119230
Query 62926 CCAGACGACTC-GAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTTTCGTA--TAGTG 62981
||| | | || ||||||| || || || | || || | | ||||| | ||
Sbjct 119229 CCACA-GCTTCTGAGCCTTGATGGTAAGACGGCCACGTCCTTCC-CGCTCGTACTTGATG 119172
Query 62982 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGAC 63041
|| | | | || || || || || | || | | ||||| || || | || |
Sbjct 119171 TAGAGAGCC--TCAAATTCCTCACCGTAGCAATCAGCTAAGCCAGGGCACTCGTTGGGGC 119114
Query 63042 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63101
|||| | | ||| || |||| | || || || ||||| || | ||| || ||||| |
Sbjct 119113 ACATGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAACAAATCGGGGATCCACA 119054
Query 63102 GAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63161
| || | || | ||| | || | | ||||| || || ||||| || || |
Sbjct 119053 GGGCAAGGAACAAATCGCGGGCGCGAATCTCCTCCTTACCGTGGTTCTTCCGGAGGTCAA 118994
Query 63162 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63221
||||| | | | ||||| |||||||| |||| ||| ||||| | | | ||||| || |
Sbjct 118993 GGAACTCAAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGACGCT 118934
Query 63222 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63281
|||| || |||||||| | ||| | ||| ||||| || | || | || ||| |||| ||
Sbjct 118933 TGTTACCACCCTGATCGACGTAACGAGCAGTGTTGTTGAAGACACGCAGCATAGGAACAA 118874
Query 63282 TACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATAT--TACT 63339
| || || || ||||| ||||| || | || ||| ||| | ||||| ||| |
Sbjct 118873 TGCCGTTCGAGGTACCGTTGGTGCCGGCAATGTAGGAACCAGTAGCACGGATACGGTGGG 118814
Query 63340 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 63399
|||| |||| || || || ||||| || ||||| | || || || | |||||
Sbjct 118813 CGTTGA--GACCGATACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATC 118756
Query 63400 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63459
|||||| || || ||||| || ||| |||||| | | || ||| ||| | || |
Sbjct 118755 ATAGATACCTTCGATACTGTCTTCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGAGG 118696
Query 63460 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAG 63519
|| || || || || || | ||||||||| |||||||| || | || || |
Sbjct 118695 CTGAGGGGTACCGGCGTTGAAGAGGGTAGGAGAGGCGTGAGTGAAGAACTTGCTCGACAT 118636
Query 63520 TAGATTGTACGTCTCAATA----GCT-GAGTCTAT-ATCCCATTGATGAATTCCTACTGC 63573
|| ||||| || || | | ||| | ||| | |||| ||| || || ||
Sbjct 118635 GAGGTTGTAAGTTTCCAGAACACGCTCAACATTATCACCCCA------AATACCGACAGC 118582
Query 63574 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 63633
|||||||| | |||||||||||| | || || |||||| | | || | | |||
Sbjct 118581 AACACGCATAATCATGTGCTGAGGACGCTCGACAATCTTGCCATCAAGCTTGAGAAGGTA 118522
Query 63634 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63693
||| | ||||| || || || ||||| || | ||| ||||| || || || | |||
Sbjct 118521 AGATCTCTCCAAGGTCTTGAATCCAAAGTACTGGTAGTTGAAGTCGCGGTCATATACAAT 118462
Query 63694 AACCGAGTTGAGTTTATCCTT 63714
|||||| || | |||||
Sbjct 118461 GGCCGAGTCCAGCTCTTCCTT 118441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633628451660800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |