Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq191 104 2e-17 >seq191 Length=257482 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| |||| || || ||||||| |||| || ||||| ||| Sbjct 143633 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCCTCT 143574 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | ||| | || | ||| ||||| || || ||||| || ||||| Sbjct 143573 GACACCATCGACAACGTCAAGTCGAAGATTCAG-GACAAGGAGGGCATTCCCCCGGACCA 143515 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| |||| ||||| || || || | || |||| || || | ||| ||||| Sbjct 143514 ACAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGTACCCTCTCCGACTACAA 143455 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 ||||| || || || || || || Sbjct 143454 CATTCAGAAGGAGTCTACTCTCCA 143431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325634029120