Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq236 147 5e-30
>seq236
Length=225512
Score = 147 bits (162), Expect = 5e-30
Identities = 313/465 (67%), Gaps = 8/465 (2%)
Strand=Plus/Minus
Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 243348
|||||| ||||||| || |||| | ||||| ||||| | || || || |||
Sbjct 196943 TTTGCTCAGCGTCTTGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGTGCTTTT 196884
Query 243349 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 243408
| |||||||||||||||| || ||| ||||||| || | | | || ||||||
Sbjct 196883 GCCTCCATCTTTTGGCTGCGCAAGCGTGGTATGATGCCCGGTTTGACTTTCTCCAACGAG 196824
Query 243409 TTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTC 243468
| ||| ||| || ||||| |||||| | || | ||| | | || | ||
Sbjct 196823 CTTATCTCTCGTGATGAGGGTCTTCACACGGACTTTGCCTGCCTTCTTTTCTCTCACCT- 196765
Query 243469 CAGAACAAGCTACCATTCGAAACGGTCAAACAA----ATCATCACAGAAGCAGTTGAAAA 243524
|||||| | || | || | || | | | |||||||| || || || | |
Sbjct 196764 --GAACAACCGCCCCAGC-AAGCAGTTGATCCAGGACATCATCACTGATGCCGTCGTCAT 196708
Query 243525 CGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACT 243584
|| ||||| ||| || ||| ||| |||| ||| ||| | || ||||| |||| ||
Sbjct 196707 TGAGAAGGAGTTCCTTACCGAGGCTCTTCCCTGCGCTCTTCTCGGTATGAATGCTGACCT 196648
Query 243585 CATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAA 243644
|||| | |||||||| ||||| |||||||| || | |||| || ||| | || ||
Sbjct 196647 CATGAAAACCTACATCGAGTTCGTCGCCGACCGTCTTCTGGTCGCTCTCGGTAACGACAA 196588
Query 243645 AGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAAC 243704
|||||||| ||| |||||||| | ||| |||||| ||| || ||| || || ||
Sbjct 196587 GGTGTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGAAAGAC 196528
Query 243705 TAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGT 243749
||||||||||| |||||||| |||||| ||| |||||||
Sbjct 196527 CAACTTCTTCGAGAAGCGTGTTGCTGATTACCAAAAGGCTGGTGT 196483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102873669468800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |