Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq236 147 5e-30 >seq236 Length=225512 Score = 147 bits (162), Expect = 5e-30 Identities = 313/465 (67%), Gaps = 8/465 (2%) Strand=Plus/Minus Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 243348 |||||| ||||||| || |||| | ||||| ||||| | || || || ||| Sbjct 196943 TTTGCTCAGCGTCTTGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGTGCTTTT 196884 Query 243349 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 243408 | |||||||||||||||| || ||| ||||||| || | | | || |||||| Sbjct 196883 GCCTCCATCTTTTGGCTGCGCAAGCGTGGTATGATGCCCGGTTTGACTTTCTCCAACGAG 196824 Query 243409 TTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTC 243468 | ||| ||| || ||||| |||||| | || | ||| | | || | || Sbjct 196823 CTTATCTCTCGTGATGAGGGTCTTCACACGGACTTTGCCTGCCTTCTTTTCTCTCACCT- 196765 Query 243469 CAGAACAAGCTACCATTCGAAACGGTCAAACAA----ATCATCACAGAAGCAGTTGAAAA 243524 |||||| | || | || | || | | | |||||||| || || || | | Sbjct 196764 --GAACAACCGCCCCAGC-AAGCAGTTGATCCAGGACATCATCACTGATGCCGTCGTCAT 196708 Query 243525 CGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACT 243584 || ||||| ||| || ||| ||| |||| ||| ||| | || ||||| |||| || Sbjct 196707 TGAGAAGGAGTTCCTTACCGAGGCTCTTCCCTGCGCTCTTCTCGGTATGAATGCTGACCT 196648 Query 243585 CATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAA 243644 |||| | |||||||| ||||| |||||||| || | |||| || ||| | || || Sbjct 196647 CATGAAAACCTACATCGAGTTCGTCGCCGACCGTCTTCTGGTCGCTCTCGGTAACGACAA 196588 Query 243645 AGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAAC 243704 |||||||| ||| |||||||| | ||| |||||| ||| || ||| || || || Sbjct 196587 GGTGTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGAAAGAC 196528 Query 243705 TAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGT 243749 ||||||||||| |||||||| |||||| ||| ||||||| Sbjct 196527 CAACTTCTTCGAGAAGCGTGTTGCTGATTACCAAAAGGCTGGTGT 196483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102873669468800