Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq405 174 2e-38 seq236 95.1 1e-14 >seq405 Length=464752 Score = 174 bits (192), Expect = 2e-38 Identities = 946/1498 (63%), Gaps = 31/1498 (2%) Strand=Plus/Minus Query 113903 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 113962 |||||||| |||||||| || | || | | | || || || | ||||| ||| Sbjct 119975 TTGACAACCTGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTTGAAGTGTAAGGC 119916 Query 113963 TCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATG 114022 || |||||||| |||||||||| || |||| || ||||| ||||||||||| |||| Sbjct 119915 TCGAAGCACTCGTTGTTACCCAGAATCTGGGAAGTTGAGGCAGTGGGCATGGGCGCCACA 119856 Query 114023 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA- 114081 || || ||| || | ||| || | | | || | || || || | || ||| || | Sbjct 119855 AGCAGCGAGTTGCGAACACCGTTCTGCTTGATCTGCTCTTTCAGAGAGTTCCAATCCCAC 119796 Query 114082 -GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCG 114140 | | | || | | | | |||||| || ||||| |||||||| |||||| | || | Sbjct 119795 AGGTCA-CTGGGGGTGACA-TCCCACATGTCGAACTGAAGGATACCCTGGGAGACAGGAG 119738 Query 114141 ATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGG 114200 | ||||| | ||| ||| || || ||||| | || | ||| | || || |||| Sbjct 119737 AGCCCTCGTAGGTCGAGTAAGGACCTTCAACAGCGGCGATGTCGCATGAAGCTTCCAGGG 119678 Query 114201 CTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCA 114259 | ||||| || || |||||||| || | || | || | | ||||| | || ||| Sbjct 119677 CAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAGCTGACGAG-CCTCGGCAGACTCA 119619 Query 114260 AACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGG 114319 || | | || | || |||| || ||||| |||||||| | ||||| || Sbjct 119618 AAAGGCATGCGAAGGGCCAGGAAGGCATCGGCCAGACCCTGGACACCAACACCAATGGGA 119559 Query 114320 CGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACC 114379 || || | ||| || || || || | || || || ||| ||| || | Sbjct 119558 CGGTGACGCATGTTGCTGTTCCGGGCCTCGACAACAGGGTAGTGGTTCACATCAATGATA 119499 Query 114380 CTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAAC-- 114437 | || | || | |||||||| |||| || || ||||| | | | || | | Sbjct 119498 CGGTTCAAGTTGCGGACAACAACCTTGGTGACATCGTGCAGCTTCTGGAAGTCGTAGCAG 119439 Query 114438 -TGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAG 114496 || || | ||| ||||| ||| || |||| ||||||| || ||||||| | Sbjct 119438 TTGTTGGTGTAGTCA---ACATAGGCAGGGAGAGCGACCGACGCCAAGTTGCACACAGCG 119382 Query 114497 GTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTG 114556 |||||| | | |||||| ||||| || || || | || ||||| |||||| Sbjct 119381 ACCTCATCAGGAGCGCAGTACTCGATAATCTCAGTGCAAAGGTTGGAACTGCGAATGGTT 119322 Query 114557 CCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTC 114616 |||| |||||| || || ||| ||| || ||||||||| | |||| | || | Sbjct 119321 CCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTACAACATGAAAGGGTTA 119262 Query 114617 CCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGT--G 114673 || ||||| || || | | |||||||| | ||| | | || | | || | | || | Sbjct 119261 CCAGTCTCAGTCTGAGCTTCCAGAATAGCATACCACAGCTTCTGAGCCTTG-ATGGTAAG 119203 Query 114674 GCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACG 114733 || | | || || ||| ||||||||| ||||||| || ||||| || ||||| | Sbjct 119202 ACG--GCCACGTCCTTCCCGCTCGTACTTGATGTAGAGAGCCTCAAATTCCTCACCGTAG 119145 Query 114734 GCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCA 114793 || | | || || || | ||||| | ||| | ||||| || || |||| Sbjct 119144 CAATCAGCTAAGCCAGGGCACTCGTTGGGGCACATGAGGGTCCATTCGCCGTTCTTCTCA 119085 Query 114794 ACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCT 114853 |||||||||||||| | || |||||||| || || ||| | ||| || |||| Sbjct 119084 ACACGCTTCATGAACAAATCGGGGATCCACAGGGCAAGGAACAAATCGCGGGCGCGAATC 119025 Query 114854 TCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGT 114913 || || | || || || || | || | || || | | ||| ||||||||||| Sbjct 119024 TCCTCCTTACCGTGGTTCTTCCGGAGGTCAAGGAACTCAAACACATCAGCGTGCCACGGC 118965 Query 114914 TCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTC 114967 |||||||| | || | | || | |||| |||| |||| | || || | Sbjct 118964 TCCAGGTAAATGGCAAAAGCACC---AGGACGCTTGTTACCACCCTGATCGACGTAACGA 118908 Query 114968 GCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCC 115027 || ||| || || || || ||||| |||| || || | || || || || || Sbjct 118907 GCAGTGTTGTTGAAGACACGCAGCATAGGAACAATGCCGTTCGAGGTACCGTTGGTGCCG 118848 Query 115028 CGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCAC 115087 ||| || | | || | || | ||| || | ||| ||||| || ||| | Sbjct 118847 GCAATGTAGGAACCAGTAGCACGGATACGGTGGGCGTTGAGACCGATACCACCCGCCATC 118788 Query 115088 TTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTA 115147 || ||||| || || | |||| | | ||||| || ||||| ||| |||| Sbjct 118787 TTGGAGATCATAGCACAGGTCTTGAGGGTATCATAGATACCTTCGATACTGTCTTCCTTC 118728 Query 115148 TTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTT 115207 | | | | ||||||| || | || ||| || ||||| |||||||||||||| Sbjct 118727 ATGTCTACCAAGAAGCAGGAAGAAAGCTGAGGCTGAGGGGTACCGGCGTTGAAGAGGGTA 118668 Query 115208 GGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGG 115265 || | ||||| ||| | | |||| ||||| | ||| || |||| || Sbjct 118667 GGAGAGGCGTGAGTGA--AGAACTTGCTCGACATGAGGTTGTAAGTTTCCAGAACACGCT 118610 Query 115266 GAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCA 115325 || | || || |||||||| | || ||||||| ||||| || || || | Sbjct 118609 CAACATTATCACCCCAAATACCGACAGCAACACGCATAATCATGTGCTGAGGACGCTCGA 118550 Query 115326 TCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383 | | ||||| ||| | | |||||| ||||||||||||||| ||||| || Sbjct 118549 CAATCTTGCCATCAAGCTTGAGAAGGTAAGATCTCTCCAAGGTCTTGAATCCAAAGTA 118492 >seq236 Length=225512 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| |||||||| ||||| ||||| || || || ||||| || || Sbjct 196785 GGCAAAGTCCGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAAACC 196844 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| | ||| ||||| || ||| || || | ||| | ||| ||||||||||| Sbjct 196845 GGGCATCATACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAAGCACCAGAGAAGAAGAT 196904 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222 ||||| ||| || || |||| ||||||| |||||| | ||||| |||| Sbjct 196905 ACCCTCAACAGCGGCAAAGGCAACAAGACGCTGAGCAAAAG---TCGACTCCTTGTCAGT 196961 Query 126223 AAACCACTTCATCGCCCACTGCGCCTT 126249 || |||||||| ||||| | ||||| Sbjct 196962 AATCCACTTCAGGGCCCAGTCGGCCTT 196988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350254819840