Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq405 174 2e-38
seq236 95.1 1e-14
>seq405
Length=464752
Score = 174 bits (192), Expect = 2e-38
Identities = 946/1498 (63%), Gaps = 31/1498 (2%)
Strand=Plus/Minus
Query 113903 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 113962
|||||||| |||||||| || | || | | | || || || | ||||| |||
Sbjct 119975 TTGACAACCTGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTTGAAGTGTAAGGC 119916
Query 113963 TCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATG 114022
|| |||||||| |||||||||| || |||| || ||||| ||||||||||| ||||
Sbjct 119915 TCGAAGCACTCGTTGTTACCCAGAATCTGGGAAGTTGAGGCAGTGGGCATGGGCGCCACA 119856
Query 114023 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA- 114081
|| || ||| || | ||| || | | | || | || || || | || ||| || |
Sbjct 119855 AGCAGCGAGTTGCGAACACCGTTCTGCTTGATCTGCTCTTTCAGAGAGTTCCAATCCCAC 119796
Query 114082 -GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCG 114140
| | | || | | | | |||||| || ||||| |||||||| |||||| | || |
Sbjct 119795 AGGTCA-CTGGGGGTGACA-TCCCACATGTCGAACTGAAGGATACCCTGGGAGACAGGAG 119738
Query 114141 ATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGG 114200
| ||||| | ||| ||| || || ||||| | || | ||| | || || ||||
Sbjct 119737 AGCCCTCGTAGGTCGAGTAAGGACCTTCAACAGCGGCGATGTCGCATGAAGCTTCCAGGG 119678
Query 114201 CTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCA 114259
| ||||| || || |||||||| || | || | || | | ||||| | || |||
Sbjct 119677 CAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAGCTGACGAG-CCTCGGCAGACTCA 119619
Query 114260 AACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGG 114319
|| | | || | || |||| || ||||| |||||||| | ||||| ||
Sbjct 119618 AAAGGCATGCGAAGGGCCAGGAAGGCATCGGCCAGACCCTGGACACCAACACCAATGGGA 119559
Query 114320 CGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACC 114379
|| || | ||| || || || || | || || || ||| ||| || |
Sbjct 119558 CGGTGACGCATGTTGCTGTTCCGGGCCTCGACAACAGGGTAGTGGTTCACATCAATGATA 119499
Query 114380 CTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAAC-- 114437
| || | || | |||||||| |||| || || ||||| | | | || | |
Sbjct 119498 CGGTTCAAGTTGCGGACAACAACCTTGGTGACATCGTGCAGCTTCTGGAAGTCGTAGCAG 119439
Query 114438 -TGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAG 114496
|| || | ||| ||||| ||| || |||| ||||||| || ||||||| |
Sbjct 119438 TTGTTGGTGTAGTCA---ACATAGGCAGGGAGAGCGACCGACGCCAAGTTGCACACAGCG 119382
Query 114497 GTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTG 114556
|||||| | | |||||| ||||| || || || | || ||||| ||||||
Sbjct 119381 ACCTCATCAGGAGCGCAGTACTCGATAATCTCAGTGCAAAGGTTGGAACTGCGAATGGTT 119322
Query 114557 CCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTC 114616
|||| |||||| || || ||| ||| || ||||||||| | |||| | || |
Sbjct 119321 CCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTACAACATGAAAGGGTTA 119262
Query 114617 CCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGT--G 114673
|| ||||| || || | | |||||||| | ||| | | || | | || | | || |
Sbjct 119261 CCAGTCTCAGTCTGAGCTTCCAGAATAGCATACCACAGCTTCTGAGCCTTG-ATGGTAAG 119203
Query 114674 GCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACG 114733
|| | | || || ||| ||||||||| ||||||| || ||||| || ||||| |
Sbjct 119202 ACG--GCCACGTCCTTCCCGCTCGTACTTGATGTAGAGAGCCTCAAATTCCTCACCGTAG 119145
Query 114734 GCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCA 114793
|| | | || || || | ||||| | ||| | ||||| || || ||||
Sbjct 119144 CAATCAGCTAAGCCAGGGCACTCGTTGGGGCACATGAGGGTCCATTCGCCGTTCTTCTCA 119085
Query 114794 ACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCT 114853
|||||||||||||| | || |||||||| || || ||| | ||| || ||||
Sbjct 119084 ACACGCTTCATGAACAAATCGGGGATCCACAGGGCAAGGAACAAATCGCGGGCGCGAATC 119025
Query 114854 TCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGT 114913
|| || | || || || || | || | || || | | ||| |||||||||||
Sbjct 119024 TCCTCCTTACCGTGGTTCTTCCGGAGGTCAAGGAACTCAAACACATCAGCGTGCCACGGC 118965
Query 114914 TCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTC 114967
|||||||| | || | | || | |||| |||| |||| | || || |
Sbjct 118964 TCCAGGTAAATGGCAAAAGCACC---AGGACGCTTGTTACCACCCTGATCGACGTAACGA 118908
Query 114968 GCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCC 115027
|| ||| || || || || ||||| |||| || || | || || || || ||
Sbjct 118907 GCAGTGTTGTTGAAGACACGCAGCATAGGAACAATGCCGTTCGAGGTACCGTTGGTGCCG 118848
Query 115028 CGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCAC 115087
||| || | | || | || | ||| || | ||| ||||| || ||| |
Sbjct 118847 GCAATGTAGGAACCAGTAGCACGGATACGGTGGGCGTTGAGACCGATACCACCCGCCATC 118788
Query 115088 TTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTA 115147
|| ||||| || || | |||| | | ||||| || ||||| ||| ||||
Sbjct 118787 TTGGAGATCATAGCACAGGTCTTGAGGGTATCATAGATACCTTCGATACTGTCTTCCTTC 118728
Query 115148 TTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTT 115207
| | | | ||||||| || | || ||| || ||||| ||||||||||||||
Sbjct 118727 ATGTCTACCAAGAAGCAGGAAGAAAGCTGAGGCTGAGGGGTACCGGCGTTGAAGAGGGTA 118668
Query 115208 GGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGG 115265
|| | ||||| ||| | | |||| ||||| | ||| || |||| ||
Sbjct 118667 GGAGAGGCGTGAGTGA--AGAACTTGCTCGACATGAGGTTGTAAGTTTCCAGAACACGCT 118610
Query 115266 GAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCA 115325
|| | || || |||||||| | || ||||||| ||||| || || || |
Sbjct 118609 CAACATTATCACCCCAAATACCGACAGCAACACGCATAATCATGTGCTGAGGACGCTCGA 118550
Query 115326 TCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383
| | ||||| ||| | | |||||| ||||||||||||||| ||||| ||
Sbjct 118549 CAATCTTGCCATCAAGCTTGAGAAGGTAAGATCTCTCCAAGGTCTTGAATCCAAAGTA 118492
>seq236
Length=225512
Score = 95.1 bits (104), Expect = 1e-14
Identities = 146/207 (71%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||| |||||||| ||||| ||||| || || || ||||| || ||
Sbjct 196785 GGCAAAGTCCGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAAACC 196844
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
||||| | ||| ||||| || ||| || || | ||| | ||| |||||||||||
Sbjct 196845 GGGCATCATACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAAGCACCAGAGAAGAAGAT 196904
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222
||||| ||| || || |||| ||||||| |||||| | ||||| ||||
Sbjct 196905 ACCCTCAACAGCGGCAAAGGCAACAAGACGCTGAGCAAAAG---TCGACTCCTTGTCAGT 196961
Query 126223 AAACCACTTCATCGCCCACTGCGCCTT 126249
|| |||||||| ||||| | |||||
Sbjct 196962 AATCCACTTCAGGGCCCAGTCGGCCTT 196988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597350254819840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |