Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq191 100 3e-16
>seq191
Length=257482
Score = 100 bits (110), Expect = 3e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || || || || ||||||||||| | || |||||| | ||
Sbjct 143650 AGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCC 143709
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||||||||| || |||| || ||||||||||| || ||||| || || || ||
Sbjct 143710 TCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 143769
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | ||||| || || || || | || | ||||
Sbjct 143770 TGGATCTTGGACTTGACATTGTCAATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTC 143829
Query 64412 TTGCCGGT 64419
||||||||
Sbjct 143830 TTGCCGGT 143837
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | | ||| || |||| || |||||||| ||
Sbjct 142981 GTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCCTCCAGCTGCTTACCA 143040
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || || ||||||||||| || ||||| || || || || || || || |||
Sbjct 143041 GCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTG 143100
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | |||||| | || || || | ||| | |||||||||||||| |||
Sbjct 143101 ACGTTGTCGATGGTATCAGAAGACTCGACCTCAAGAGTGATGGTCTTGCCGGTCAGAGTC 143160
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 143161 TTCACGAAGATCTGCAT 143177
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || || || || || |||||||| || | || || || | || |||||||||
Sbjct 143203 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCCATCCTCAAGCTGC 143262
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| || || |||| || ||||||||||| || || || || || || || || || ||
Sbjct 143263 TTACCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 143322
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGG 64418
||| ||| || | |||| ||| || || || || | || | |||||||||||
Sbjct 143323 GACTTAACATTGTCGATAGTAT--CCGACGACTCGACCTCAAGGGTAATGGTCTTGCCGG 143380
Query 64419 TCAAAGTTTTTACGAAAATTTGCAT 64443
||| || || |||||||| |||||
Sbjct 143381 TCAGGGTCTTGACGAAAATCTGCAT 143405
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || ||||||||||| || | || ||| || | || ||||||||||| ||
Sbjct 143437 GTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCAAGCTGCTTACCA 143496
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || || ||||| ||||| || ||||| || || || || || || || |||
Sbjct 143497 GCAAAGATAAGACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTG 143556
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | || ||| || || || || | ||| | ||||||||| |||| |||
Sbjct 143557 ACGTTGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTGCCAGTCAGAGTC 143616
Query 64427 TTTACGAAAATTTGCAT 64443
|| || || || |||||
Sbjct 143617 TTGACAAAGATCTGCAT 143633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499642001989120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |