Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq405 197 1e-45
>seq405
Length=464752
Score = 197 bits (218), Expect = 1e-45
Identities = 441/656 (67%), Gaps = 12/656 (2%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| ||||| || |||||| || ||||| |||||| | ||||||
Sbjct 118483 AACTACCAGTACTTTGGATTCAAGACCTTGGAGAGATCTTACCTTCTCAAGCTTGATGGC 118542
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || |||||| || || || || | ||||| || || |||| ||| || |
Sbjct 118543 AAGATTGTCGAGCGTCCTCAGCACATGATTATGCGTGTTGCTGTCGGTATTTGGGGTGAT 118602
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
| | | |||| || ||| || |||| | |||| | || |||
Sbjct 118603 AATGTTGAGCGTGTTCTGGAAACTTACAACCTCATGTCGAGCAAGTTCTTCACTCACGCC 118662
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
| || ||||| |||||||| || ||||| ||| ||| | ||||| || ||| || |
Sbjct 118663 TCTCCTACCCTCTTCAACGCCGGTACCCCTCAGCCTCAGCTTTCTTCCTGCTTCTTGGTA 118722
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| ||| ||| || || | || | ||||||| |||||| | ||
Sbjct 118723 GAC-ATGAAGGAAGACAGTATCGAAGGTATCTATGATACCCTCAAGACCTGTGCTATGAT 118781
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCC 94071
||| || ||||| || ||||| ||| | |||| |||| ||||| | ||||||
Sbjct 118782 CTCCAAGATGGCGGGTGGTATCGGTCTCAACGCCCAC--CGTATCCGTGCTACTGGTTCC 118839
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
||||| ||| ||||| || ||||| |||||| | || |||||||| || |||||||||
Sbjct 118840 TACATTGCCGGCACCAACGGTACCTCGAACGGCATTGTTCCTATGCTGCGTGTCTTCAAC 118899
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || || ||||| || ||||||||| | | | ||| |||| || | ||
Sbjct 118900 AACACTGCTCGTTACGTCGATCAGGGTGGTAACAAGCGTCCTGGTGCTTTTGCCATTTAC 118959
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|| ||||| |||||||| || ||| | ||| | ||||| || ||||||||||| ||
Sbjct 118960 CTGGAGCCGTGGCACGCTGATGTGTTTGAGTTCCTTGACCTCCGGAAGAACCACGGTAAG 119019
Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308
|| ||||| | ||| | || | ||| || || ||| | || || | || |||
Sbjct 119020 GA---GGAGATTCGCGCCCGCGATTTGTTCCTTGCCCTGTGGATCCCCGATTTGTTCATG 119076
Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364
|| || || ||||| ||| || |||| || | || ||||| || || || ||
Sbjct 119077 AAGCGTGTTGAGAAGAACGGCGAATGGACCCTCATGTGCCCCAACGAGTGCCCTGG 119132
Score = 132 bits (146), Expect = 5e-26
Identities = 263/383 (69%), Gaps = 6/383 (2%)
Strand=Plus/Plus
Query 94993 CAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAA 95052
||||| || ||||||||||| | |||| ||| | ||| | |||| || ||| |
Sbjct 119749 CAGGGTATCCTTCAGTTCGACATGTGGGATGTCACCCCCAGTGACCTGTGGGATTGGAAC 119808
Query 95053 GCTCT--ACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCA 95110
|||| | | || ||| | || | ||||||| ||| ||||||||||||| ||||
Sbjct 119809 TCTCTGAAAGAGCAGATCA-AGCAGA-ACGGTGTTCGCAACTCGCTGCTTGTGGCGCCCA 119866
Query 95111 TGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCT 95170
||||||| ||||| || | ||||| || || |||||||||| ||||| || | ||| |
Sbjct 119867 TGCCCACTGCCTCAACTTCCCAGATTCTGGGTAACAACGAGTGCTTCGAGCCTTACACTT 119926
Query 95171 CCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCC 95230
| ||| | ||| | | || ||| | || || || |||| || ||||| | |
Sbjct 119927 CAAACATTTACCAGCGCCGTGTGTTGGCTGGTGAGTTCCAGGTTGTCAACCCTTGGTTGC 119986
Query 95231 TACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGC 95289
| || |||| || | | || ||| ||||| || || | ||||||| | |
Sbjct 119987 TTCGCGACCTTGTTGAC-CTTGGTCTGTGGTCGGATAACATGAAGAACCGCATCATTTCG 120045
Query 95290 GCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAG 95349
| |||||| || || ||||||||||| || || | |||||||||| | || ||||||
Sbjct 120046 GACAACGGTTCTGTTCAGAACATCCCCAGCATTCCCGCGGACATCAAGTCTCTGTACAAG 120105
Query 95350 ACCGTGTGGGAGATCCCGCAGCG 95372
|| || |||||||| | |||||
Sbjct 120106 ACTGTTTGGGAGATTTCTCAGCG 120128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494720429550080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |