Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq405 163 3e-35
seq236 91.5 2e-13
>seq405
Length=464752
Score = 163 bits (180), Expect = 3e-35
Identities = 953/1504 (63%), Gaps = 43/1504 (3%)
Strand=Plus/Minus
Query 115864 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGC 115923
|||||||| |||||||| || | || | | | || ||||| | ||||| |||
Sbjct 119975 TTGACAACCTGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTTGAAGTGTAAGGC 119916
Query 115924 TCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATG 115983
|| |||||||| |||||||||| || |||| || ||||| ||||||||||| ||||
Sbjct 119915 TCGAAGCACTCGTTGTTACCCAGAATCTGGGAAGTTGAGGCAGTGGGCATGGGCGCCACA 119856
Query 115984 AGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA- 116042
|| || |||||| | ||| | | | || | || || || | || ||| || |
Sbjct 119855 AGCAGCGAGTTGCGAACACCGTTCTGCTTGATCTGCTCTTTCAGAGAGTTCCAATCCCAC 119796
Query 116043 -GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCG 116101
| | | || | | | |||||||| || ||||| |||||||| ||||| | || |
Sbjct 119795 AGGTCA-CTGGGGGTGACA-TCCCACATGTCGAACTGAAGGATACCCTGGGAGACAGGAG 119738
Query 116102 ATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGG 116161
| ||||| | ||| || || || ||||| | || | ||| | || || ||||
Sbjct 119737 AGCCCTCGTAGGTCGAGTAAGGACCTTCAACAGCGGCGATGTCGCATGAAGCTTCCAGGG 119678
Query 116162 CTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCA 116220
| ||||| || || |||||||| || | || | || | | ||||| | || |||
Sbjct 119677 CAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAGCTGACGAG-CCTCGGCAGACTCA 119619
Query 116221 AACGCGA---GACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 116277
|| | | || || || | | |||| || ||||| |||||||| | |||||
Sbjct 119618 AAAGGCATGCGAAGGGCCAGGA---AGGCATCGGCCAGACCCTGGACACCAACACCAATG 119562
Query 116278 GGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATA 116337
|| || || | ||| || || || || | || || || ||| ||| ||
Sbjct 119561 GGACGGTGACGCATGTTGCTGTTCCGGGCCTCGACAACAGGGTAGTGGTTCACATCAATG 119502
Query 116338 ACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA 116397
| | || | || | |||||||| |||| || || ||||| | | | || |
Sbjct 119501 ATACGGTTCAAGTTGCGGACAACAACCTTGGTGACATCGTGCAGCTTCTGGAAGTCGTAG 119442
Query 116398 C---TGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 116454
| || || | ||| ||||| ||| || |||| ||||||| || ||||||
Sbjct 119441 CAGTTGTTGGTGTAGTCA---ACATAGGCAGGGAGAGCGACCGACGCCAAGTTGCACACA 119385
Query 116455 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 116514
| | |||||| | | |||||| ||||| || || || | || ||||| ||||
Sbjct 119384 GCGACCTCATCAGGAGCGCAGTACTCGATAATCTCAGTGCAAAGGTTGGAACTGCGAATG 119325
Query 116515 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGC 116574
|| |||| |||||| || || ||| ||| || ||||||||| | ||| | ||
Sbjct 119324 GTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTACAACATGAAAGGG 119265
Query 116575 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGT 116633
| || ||||| || || | | |||||||| | ||| | | || | | || | | ||
Sbjct 119264 TTACCAGTCTCAGTCTGAGCTTCCAGAATAGCATACCACAGCTTCTGAGCCTTG-ATGGT 119206
Query 116634 --GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCC 116691
| || | | || || ||| ||||||||| ||||||| |||||||| || |||||
Sbjct 119205 AAGACG--GCCACGTCCTTCCCGCTCGTACTTGATGTAGAGAGCCTCAAATTCCTCACCG 119148
Query 116692 ACAGCC-TCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTC 116750
||| || | | || || || | || || | ||| | ||||| || ||
Sbjct 119147 T-AGCAATCAGCTAAGCCAGGGCACTCGTTGGGGCACATGAGGGTCCATTCGCCGTTCTT 119089
Query 116751 CTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCG 116810
|||||| ||||||||||| | || |||||||| || || ||| | ||| || |||
Sbjct 119088 CTCAACACGCTTCATGAACAAATCGGGGATCCACAGGGCAAGGAACAAATCGCGGGCGCG 119029
Query 116811 AGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCA 116870
| || || | || || || || | || | || || | | ||| ||||||||
Sbjct 119028 AATCTCCTCCTTACCGTGGTTCTTCCGGAGGTCAAGGAACTCAAACACATCAGCGTGCCA 118969
Query 116871 CGGTTCCAGGTACACCGCGATTG-AC-----CCCTTGCGACGACCAGCCTGGTTTACATA 116924
||| |||||||| | || | | || | |||| |||| |||| | || ||
Sbjct 118968 CGGCTCCAGGTAAATGGCAAAAGCACCAGGACGCTTG---TTACCACCCTGATCGACGTA 118912
Query 116925 CCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT 116984
| || || ||| || || || ||||| |||| || || | || || || ||
Sbjct 118911 ACGAGCAGTGTTGTTGAAGACACGCAGCATAGGAACAATGCCGTTCGAGGTACCGTTGGT 118852
Query 116985 CCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCT 117042
|| || || || || | | || | || | |||| || | ||| ||||| ||
Sbjct 118851 GCCGGCAATGTAGGA-ACCAG-TAGCACGGATACGGTGGGCGTTGAGACCGATACCACCC 118794
Query 117043 GCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCA 117102
||| ||| ||||| || || | |||| | | ||||| || ||||| |||
Sbjct 118793 GCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATCATAGATACCTTCGATACTGTCT 118734
Query 117103 CCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAG 117162
|||| | | | | ||||||| || | || ||| || ||||| |||||||||
Sbjct 118733 TCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGAGGCTGAGGGGTACCGGCGTTGAAG 118674
Query 117163 AGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGA 117220
||||| || | ||||| ||| | | |||| ||||| | ||| || |||| |
Sbjct 118673 AGGGTAGGAGAGGCGTGAGTGA--AGAACTTGCTCGACATGAGGTTGTAAGTTTCCAGAA 118616
Query 117221 CAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTG 117280
|| || | || || |||||||| | || ||||||| ||||| || ||
Sbjct 118615 CACGCTCAACATTATCACCCCAAATACCGACAGCAACACGCATAATCATGTGCTGAGGAC 118556
Query 117281 TTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAA 117340
|| | | | ||||| ||| | | |||||| ||||||||||||||| ||||
Sbjct 118555 GCTCGACAATCTTGCCATCAAGCTTGAGAAGGTAAGATCTCTCCAAGGTCTTGAATCCAA 118496
Query 117341 AATA 117344
| ||
Sbjct 118495 AGTA 118492
>seq236
Length=225512
Score = 91.5 bits (100), Expect = 2e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| |||||||| ||||| ||||| || || || ||||| || |||
Sbjct 196786 GCAAAGTCCGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAAACCG 196845
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||| | ||| ||||| || ||| || || | ||| | ||||||||||||||
Sbjct 196846 GGCATCATACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAAGCACCAGAGAAGAAGATA 196905
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAA 127698
||||| ||| || || |||| ||||||| ||||| | || | |||| | ||
Sbjct 196906 CCCTCAACAGCGGCAAAGGCAACAAGACGCTGAGCAAAAG-TCGACTCCTTGTCAGTAAT 196964
Query 127699 CCACTTCATCGCCCACTGTGCCTT 127722
|||||||| ||||| | |||||
Sbjct 196965 CCACTTCAGGGCCCAGTCGGCCTT 196988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613503764359680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |