Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq405 163 3e-35 seq236 91.5 2e-13 >seq405 Length=464752 Score = 163 bits (180), Expect = 3e-35 Identities = 953/1504 (63%), Gaps = 43/1504 (3%) Strand=Plus/Minus Query 115864 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGC 115923 |||||||| |||||||| || | || | | | || ||||| | ||||| ||| Sbjct 119975 TTGACAACCTGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTTGAAGTGTAAGGC 119916 Query 115924 TCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATG 115983 || |||||||| |||||||||| || |||| || ||||| ||||||||||| |||| Sbjct 119915 TCGAAGCACTCGTTGTTACCCAGAATCTGGGAAGTTGAGGCAGTGGGCATGGGCGCCACA 119856 Query 115984 AGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA- 116042 || || |||||| | ||| | | | || | || || || | || ||| || | Sbjct 119855 AGCAGCGAGTTGCGAACACCGTTCTGCTTGATCTGCTCTTTCAGAGAGTTCCAATCCCAC 119796 Query 116043 -GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCG 116101 | | | || | | | |||||||| || ||||| |||||||| ||||| | || | Sbjct 119795 AGGTCA-CTGGGGGTGACA-TCCCACATGTCGAACTGAAGGATACCCTGGGAGACAGGAG 119738 Query 116102 ATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGG 116161 | ||||| | ||| || || || ||||| | || | ||| | || || |||| Sbjct 119737 AGCCCTCGTAGGTCGAGTAAGGACCTTCAACAGCGGCGATGTCGCATGAAGCTTCCAGGG 119678 Query 116162 CTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCA 116220 | ||||| || || |||||||| || | || | || | | ||||| | || ||| Sbjct 119677 CAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAGCTGACGAG-CCTCGGCAGACTCA 119619 Query 116221 AACGCGA---GACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 116277 || | | || || || | | |||| || ||||| |||||||| | ||||| Sbjct 119618 AAAGGCATGCGAAGGGCCAGGA---AGGCATCGGCCAGACCCTGGACACCAACACCAATG 119562 Query 116278 GGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATA 116337 || || || | ||| || || || || | || || || ||| ||| || Sbjct 119561 GGACGGTGACGCATGTTGCTGTTCCGGGCCTCGACAACAGGGTAGTGGTTCACATCAATG 119502 Query 116338 ACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA 116397 | | || | || | |||||||| |||| || || ||||| | | | || | Sbjct 119501 ATACGGTTCAAGTTGCGGACAACAACCTTGGTGACATCGTGCAGCTTCTGGAAGTCGTAG 119442 Query 116398 C---TGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 116454 | || || | ||| ||||| ||| || |||| ||||||| || |||||| Sbjct 119441 CAGTTGTTGGTGTAGTCA---ACATAGGCAGGGAGAGCGACCGACGCCAAGTTGCACACA 119385 Query 116455 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 116514 | | |||||| | | |||||| ||||| || || || | || ||||| |||| Sbjct 119384 GCGACCTCATCAGGAGCGCAGTACTCGATAATCTCAGTGCAAAGGTTGGAACTGCGAATG 119325 Query 116515 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGC 116574 || |||| |||||| || || ||| ||| || ||||||||| | ||| | || Sbjct 119324 GTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTACAACATGAAAGGG 119265 Query 116575 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGT 116633 | || ||||| || || | | |||||||| | ||| | | || | | || | | || Sbjct 119264 TTACCAGTCTCAGTCTGAGCTTCCAGAATAGCATACCACAGCTTCTGAGCCTTG-ATGGT 119206 Query 116634 --GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCC 116691 | || | | || || ||| ||||||||| ||||||| |||||||| || ||||| Sbjct 119205 AAGACG--GCCACGTCCTTCCCGCTCGTACTTGATGTAGAGAGCCTCAAATTCCTCACCG 119148 Query 116692 ACAGCC-TCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTC 116750 ||| || | | || || || | || || | ||| | ||||| || || Sbjct 119147 T-AGCAATCAGCTAAGCCAGGGCACTCGTTGGGGCACATGAGGGTCCATTCGCCGTTCTT 119089 Query 116751 CTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCG 116810 |||||| ||||||||||| | || |||||||| || || ||| | ||| || ||| Sbjct 119088 CTCAACACGCTTCATGAACAAATCGGGGATCCACAGGGCAAGGAACAAATCGCGGGCGCG 119029 Query 116811 AGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCA 116870 | || || | || || || || | || | || || | | ||| |||||||| Sbjct 119028 AATCTCCTCCTTACCGTGGTTCTTCCGGAGGTCAAGGAACTCAAACACATCAGCGTGCCA 118969 Query 116871 CGGTTCCAGGTACACCGCGATTG-AC-----CCCTTGCGACGACCAGCCTGGTTTACATA 116924 ||| |||||||| | || | | || | |||| |||| |||| | || || Sbjct 118968 CGGCTCCAGGTAAATGGCAAAAGCACCAGGACGCTTG---TTACCACCCTGATCGACGTA 118912 Query 116925 CCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT 116984 | || || ||| || || || ||||| |||| || || | || || || || Sbjct 118911 ACGAGCAGTGTTGTTGAAGACACGCAGCATAGGAACAATGCCGTTCGAGGTACCGTTGGT 118852 Query 116985 CCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCT 117042 || || || || || | | || | || | |||| || | ||| ||||| || Sbjct 118851 GCCGGCAATGTAGGA-ACCAG-TAGCACGGATACGGTGGGCGTTGAGACCGATACCACCC 118794 Query 117043 GCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCA 117102 ||| ||| ||||| || || | |||| | | ||||| || ||||| ||| Sbjct 118793 GCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATCATAGATACCTTCGATACTGTCT 118734 Query 117103 CCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAG 117162 |||| | | | | ||||||| || | || ||| || ||||| ||||||||| Sbjct 118733 TCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGAGGCTGAGGGGTACCGGCGTTGAAG 118674 Query 117163 AGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGA 117220 ||||| || | ||||| ||| | | |||| ||||| | ||| || |||| | Sbjct 118673 AGGGTAGGAGAGGCGTGAGTGA--AGAACTTGCTCGACATGAGGTTGTAAGTTTCCAGAA 118616 Query 117221 CAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTG 117280 || || | || || |||||||| | || ||||||| ||||| || || Sbjct 118615 CACGCTCAACATTATCACCCCAAATACCGACAGCAACACGCATAATCATGTGCTGAGGAC 118556 Query 117281 TTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAA 117340 || | | | ||||| ||| | | |||||| ||||||||||||||| |||| Sbjct 118555 GCTCGACAATCTTGCCATCAAGCTTGAGAAGGTAAGATCTCTCCAAGGTCTTGAATCCAA 118496 Query 117341 AATA 117344 | || Sbjct 118495 AGTA 118492 >seq236 Length=225512 Score = 91.5 bits (100), Expect = 2e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| |||||||| ||||| ||||| || || || ||||| || ||| Sbjct 196786 GCAAAGTCCGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAAACCG 196845 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| | ||| ||||| || ||| || || | ||| | |||||||||||||| Sbjct 196846 GGCATCATACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAAGCACCAGAGAAGAAGATA 196905 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAA 127698 ||||| ||| || || |||| ||||||| ||||| | || | |||| | || Sbjct 196906 CCCTCAACAGCGGCAAAGGCAACAAGACGCTGAGCAAAAG-TCGACTCCTTGTCAGTAAT 196964 Query 127699 CCACTTCATCGCCCACTGTGCCTT 127722 |||||||| ||||| | ||||| Sbjct 196965 CCACTTCAGGGCCCAGTCGGCCTT 196988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503764359680