Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq405 152 8e-32
seq236 109 9e-19
>seq405
Length=464752
Score = 152 bits (168), Expect = 8e-32
Identities = 425/636 (67%), Gaps = 12/636 (2%)
Strand=Plus/Minus
Query 203884 CAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCA-CCCGTACATGTGCATGGAAGACA 203942
||| |||||||| || ||||| || || || ||| |||| | | ||||||| | |
Sbjct 120279 CAGGTAGTACATACCCGTCTTGAGACCAAGCTTCCAACCCGCAAA-GTGCATGCTGGTAA 120221
Query 203943 GTTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAG 204002
|||| || | | ||||| |||||||||||||| ||||| || || || ||||
Sbjct 120220 TCTTGCCCATGGTTGGGTCCTTCATGTGAATGTTCAACGACTGAGACTGATCAAT-AAAG 120162
Query 204003 GCGCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061
|| || || || || ||||| | | || || ||| ||||||||||| || ||||||
Sbjct 120161 GCACCACGGTCAGCAGCCATCTGAACAACAGTACGCTGAGAAATCTCCCAAACAGTCTTG 120102
Query 204062 AACAC-GTCTCTGGTGTGTTGAGGCACATCTTCCCACGTCCTGATC-GAGCCGTTGTCGG 204119
||| | || || ||| | || | || | || |||| | || |||||||| |
Sbjct 120101 TACAGAGACT-TGATGTCC-GCGGGAATGCTGGGGATGTTCTGAACAGAACCGTTGTCCG 120044
Query 204120 CCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCA-GCTCCCGCACC 204178
|| | | || || | | ||| ||||| | |||| | | || | || || | |
Sbjct 120043 AAATGATGCGGTTCTTCATGTTATCCGACCACA-GACCAAGGTCAACAAGGTCGCGAAGC 119985
Query 204179 AGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTG 204238
| ||||||| | ||| || || || | || ||| | || | | | |||
Sbjct 119984 AACCAAGGGTTGACAACCTGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTTGAA 119925
Query 204239 GTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATG 204298
||| | || ||||| ||||||||| || | |||||| | || ||| |||||||||
Sbjct 119924 GTGTAAGGCTCGAAGCACTCGTTGTTACCCAGAATCTGGGAAGTTGAGGCAGTGGGCATG 119865
Query 204299 GGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGC-TTCAGAGAGGT 204357
|| |||| ||||| |||||||| ||||||| | | || |||| | ||||||||| |
Sbjct 119864 GGCGCCACAAGCAGCGAGTTGCGAACACCGTTCTGCTTGA-TCTGCTCTTTCAGAGAGTT 119806
Query 204358 CCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACT 204417
||| || || ||||||| | || |||||||||||||||||| ||| || ||
Sbjct 119805 CCAATCCCACAGGTCACTGGGGGTGACATCCCACATGTCGAACTGAAGGATACCCTGGGA 119746
Query 204418 GACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGC 204477
||| || ||||| ||| |||| ||||| || | | || | | ||| || ||
Sbjct 119745 GACAGGAGAGCCCTCGTAGGTCGAGTAAGGACCTTCAACAGCGGCGATGTCGCATGAAGC 119686
Query 204478 GGCCATGGCGTGATAGTACATGGTCTCAAAGATCTG 204513
||| ||| | ||| |||||||||||||||||
Sbjct 119685 TTCCAGGGCAGCGTGGTAAATGGTCTCAAAGATCTG 119650
>seq236
Length=225512
Score = 109 bits (120), Expect = 9e-19
Identities = 320/488 (66%), Gaps = 19/488 (4%)
Strand=Plus/Plus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| ||||||||||| || | | || || |||||||| |||| |||||
Sbjct 196512 CTTCTCGAAGAAGTTGGTCTTTCCACCAAGAGAGATGTTCTCCATGAAGTCGAAGGGGTT 196571
Query 159709 CTTCACGTGATAGCGCTT--CGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAAT 159766
| | | || ||| || | |||||||| |||| | | ||| || || ||
Sbjct 196572 GGTGGCCTTGTACACCTTGTCGTTA--CCGAGAGCGACCAGAAGACGGTCGGCGACGAAC 196629
Query 159767 TCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCC 159826
||||||||| | ||| | ||| || || || || || ||| || || ||
Sbjct 196630 TCGATGTAGGTTTTCATGAGGTCAGCATTCATACCGAGAAGAGCGCAGGGAAGAGCCTCG 196689
Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGA-CACGTTCGTA 159885
| || |||||||||||||| |||| || || || | || | | || || | | |
Sbjct 196690 GTAAGGAACTCCTTCTCAATGACGACGGCATCAGTGATGATGTCCTGGATCAACTGCTTG 196749
Query 159886 CCCCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943
| ||| ||| || ||| || || ||||| |||||||| ||| ||
Sbjct 196750 CTGGGGCGGTTGTTCA------GGTGAGAGAAAAGAAGGCAGGCAAAGTCCGTGTGAAGA 196803
Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003
||||| || |||||||| | ||||||||| | | | || ||||| || ||||||
Sbjct 196804 CCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAAACCGGGCATCATACCACGC--- 196860
Query 160004 TTG---AGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCA 160060
||| |||||||| |||| ||||||||||| || ||||| ||||| || || |||
Sbjct 196861 TTGCGCAGCCAAAAGATGGAGGCAAAAGCACCAGAGAAGAAGATACCCTCAACAGCGGCA 196920
Query 160061 AACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCAT 160120
|| || || || | || | |||||| | | ||||| ||||| | ||||||
Sbjct 196921 AAGGCAACAAGACGCTGAGCAAAAGTCGACTCCTTGTCAGTAATCCACTTCAGGGCCCAG 196980
Query 160121 TCAGCCTT 160128
|| |||||
Sbjct 196981 TCGGCCTT 196988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795150747130880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |