Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq438 143 6e-29
seq191 136 9e-27
seq419 120 7e-22
>seq438
Length=409217
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||||||||| |||||||| |||| ||||||||| | || || | |||||
Sbjct 73264 AGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCC 73323
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| || |||||||||||||| ||| || || |||
Sbjct 73324 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 73383
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| |||||| | | || || |||| ||||| |||
Sbjct 73384 TGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACCTCCAGGGTGATGGTC 73443
Query 199598 TTACCCGTGAGAGTTTTCACAAAA 199621
|||||||| || || || || |||
Sbjct 73444 TTACCCGTCAGGGTCTTGACGAAA 73467
>seq191
Length=257482
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||||||||||||||| |||||||| || | ||||||||| | | ||
Sbjct 143413 CGAAGGCGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTA 143472
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||| || || ||||| |||||||| |||||||| ||| ||
Sbjct 143473 CGGCCATCCTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCCGGGGGAATGCCC 143532
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| ||| |||| |||||| | | || || || |
Sbjct 143533 TCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCAGAGGACTCAACCTCGAGA 143592
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || ||||| || ||||| || ||
Sbjct 143593 GTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTG 143630
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || |||||||| || |||||||| |||| ||||||||||| || || | || ||
Sbjct 142966 AGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCC 143025
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| || || ||||| ||||||||||||||||| ||| || || |||
Sbjct 143026 TCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 143085
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| ||| || | | || || || | ||||| |||
Sbjct 143086 TGGATCTTGCTCTTGACGTTGTCGATGGTATCAGAAGACTCGACCTCAAGAGTGATGGTC 143145
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || ||||| ||||| || || ||
Sbjct 143146 TTGCCGGTCAGAGTCTTCACGAAGATCTG 143174
Score = 98.7 bits (108), Expect = 2e-15
Identities = 141/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||||||||| || || |||||||| |||| |||||| || | | ||
Sbjct 143641 CGAAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTG 143700
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||| || ||||| || || |||||||||||||| ||| ||
Sbjct 143701 CGGCCATCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCC 143760
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || || | ||| || | | || || || |
Sbjct 143761 TCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTATCGGAGGACTCAACCTCGAGG 143820
Query 199589 GTGATCGTCTTACCCGTGA 199607
||||| ||||| || ||||
Sbjct 143821 GTGATGGTCTTGCCGGTGA 143839
Score = 91.5 bits (100), Expect = 3e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | ||| || || |||||||| |||| ||||||||| | | |||
Sbjct 143185 CGAAGACGGAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTA 143244
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||| || ||||| || || |||||||||||||| || ||
Sbjct 143245 CGGCCATCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGGATACCC 143304
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || |||| || || | | || || || |
Sbjct 143305 TCCTTGTCCTGGATCTTCGACTTAACATTGTCGATAGTATCCGACGACTCGACCTCAAGG 143364
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || || || || ||||| ||
Sbjct 143365 GTAATGGTCTTGCCGGTCAGGGTCTTGACGAAAATCTG 143402
>seq419
Length=149002
Score = 120 bits (132), Expect = 7e-22
Identities = 149/202 (74%), Gaps = 3/202 (1%)
Strand=Plus/Plus
Query 199427 TGGAGAGTCGACT--CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCT 199484
||||| || |||| |||| |||| ||||||||||| | || | ||||| |||||||
Sbjct 86387 TGGAGGGT-GACTAACCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCT 86445
Query 199485 GCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCT 199544
|||| || |||||||| || |||||||||||||| ||| || || ||||| ||||
Sbjct 86446 GCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCT 86505
Query 199545 TTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCG 199604
| ||| ||| |||| ||||| | | || || || | ||||||||||||||||
Sbjct 86506 TGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTACCCG 86565
Query 199605 TGAGAGTTTTCACAAAAATTTG 199626
| || || || || ||||| ||
Sbjct 86566 TAAGGGTCTTAACGAAAATCTG 86587
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178914832990016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |