Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq427 192 7e-44 seq53 172 7e-38 >seq427 Length=422280 Score = 192 bits (212), Expect = 7e-44 Identities = 492/746 (66%), Gaps = 31/746 (4%) Strand=Plus/Plus Query 7026 CGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTT 7085 |||| ||||| | || ||||| ||||| |||||||||||||| |||| || | || | Sbjct 361735 CGGCCTGGACGGCGGCACCGTAGGCGACAGCCTCATCGGGGTTGATCGACTTCTCAAGCT 361794 Query 7086 CTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCAC 7145 || ||||| || | || || | | | || || || ||||| || || || |||| Sbjct 361795 TCTTGCCGTTGAAGAACTCGGAAAGGAGCTTCTGGATCTTGGGGATACGGGTAGAACCAC 361854 Query 7146 CGACCAAAACGATTTCATTCACTTTCGATTTATCGA--------TCTTTGAGTCTCGAAG 7197 |||||| ||||| || | || | || || || || ||||| ||| | Sbjct 361855 CGACCAGGACGATCTCGTCAACCTGGGACTTGCTGAGGCCAGAGTCCTTGAGGACCGAGG 361914 Query 7198 TGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACA---CAGTTCCTCAAA 7254 | || || |||| | | ||| | || | | ||| ||||| || Sbjct 361915 --------CAACGGGCTCCAGAGTGCCAGCGAA---GGCCTTGGAGTTCAGCTCCTCGAA 361963 Query 7255 ACGTGCACGGGTAAT--GGATG-TATAGAAATCAACGCCGTCGTATAACGAATCAATTTC 7311 ||| |||||||| || ||| | | ||| ||| |||||| | | | ||||| || Sbjct 361964 ACGGGCACGGGTGATCTGGACGGTGTAGTCCTCA---CCGTCGAAGAGGGTGTCAATCTC 362020 Query 7312 AATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAA 7371 ||||| || || || ||||| | || ||||| || ||||| || || || || | Sbjct 362021 GATGGTGGTCTGGGCACCGGAAGAAAGGGTACGCTTGGCACGCTCGCAAGCAGTCCGGAG 362080 Query 7372 ACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTC 7431 |||||| || ||||| | | |||||||| ||| ||||| || || | || || | Sbjct 362081 ACGACGGAGAGCACGGGCATCACCGGAAAGATCCTTCTTGGTCTTGCGGGTGAAGTCCTT 362140 Query 7432 AGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGC 7491 | |||| ||| || | | |||||||| | |||||| | ||| || || || || Sbjct 362141 CTTGCAGTGGTCAAGAAGGTTGGTGTCGAAATCCTGACCACCAAGGTGAGTGTCACCAGC 362200 Query 7492 GGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACC 7551 ||| || ||||| | |||| ||| || | ||||| | || || ||||| || ||||| Sbjct 362201 GGTAGCCTTGACGGCGAAGACACCACCCTGGATGTTCAGCAGGGAGACATCGAAAGTACC 362260 Query 7552 ACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT---TTGTTCTTATCGAGACC 7608 ||||||||| || | || || ||||| || | ||| ||| | | ||||| Sbjct 362261 ACCACCCAGATCGTAGATCAGGACGTTGCGCTCCTTGTCGGACTTGCCGGCACCCAGACC 362320 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 ||| |||||||| || || || || || || || ||||| || ||| ||||||||||| Sbjct 362321 GTAAGCGATAGCGGCAGCGGTGGGCTCGTTGATGATACGGAGGACGTTAAGGCCAGCAAT 362380 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 | | ||||| || || || || || || ||||| |||||||| ||||| || | Sbjct 362381 GGCACCGGCATCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAGTAGGCGGGGACGGTAAT 362440 Query 7729 GACCGCGTCCGTGACTTTCTTACCGA 7754 ||| || | | ||| ||||| |||| Sbjct 362441 GACAGCCTTCTCGACCTTCTTGCCGA 362466 >seq53 Length=38260 Score = 172 bits (190), Expect = 7e-38 Identities = 277/398 (70%), Gaps = 0/398 (0%) Strand=Plus/Plus Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522 ||||||||||| | ||| || || || || || | ||||| || |||||||| | ||| Sbjct 11782 TCTTCACCACCAAGGTGAGTGTCACCAGCAGTGGACTTGACCTCGAAGATACCATCCTCA 11841 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582 ||| | | | |||||||| || ||||||||||| || || || || || ||||| Sbjct 11842 ATGGTAAGGAGGGAAACATCGAAAGTACCACCACCAAGATCGAAGATCAGGACGTTGCGC 11901 Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642 || | || ||||| || |||||||| ||||| || || || || || || || || Sbjct 11902 TCACCCTCGACCTTCTTGTCAAGACCGTAGGCGATGGCAGCAGCAGTAGGCTCGTTGATG 11961 Query 7643 ATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702 ||||| ||| ||| || |||||||| | ||||| || || || || || || || Sbjct 11962 ATACGGAGAACGTTAAGACCAGCAATCAAACCAGCATCCTTTGTAGCCTGACGCTGAGAG 12021 Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762 ||||| |||||||| ||||| || ||||| || | |||| | ||||||| || || Sbjct 12022 TCGTTGAAGTAGGCGGGGACAGTGACGACGGCCTGGTTGACGGTGGTACCGAGGTAGGAC 12081 Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT 7822 || || | || ||| ||| | || ||||| || || ||||| || | | || Sbjct 12082 TCAGCAGTCTCACGCATCTTGATCAGGACCATGGAGGAGATCTCCTCGGGAGTGAAGGTC 12141 Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860 || || ||||| || || ||||| || || | ||| || Sbjct 12142 TTGGTCTCACCCTTGAACTCAACCTCGATGACGGGCTT 12179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129243256320