Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq405 206 3e-48 seq236 129 7e-25 >seq405 Length=464752 Score = 206 bits (228), Expect = 3e-48 Identities = 890/1392 (64%), Gaps = 29/1392 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| | ||||| || || ||||||| || || || |||| |||| Sbjct 118558 CCTCAGCACATGATTATGCGTGTTGCTGTCGGTATTTGGGGTGATAATGTTGAGCGTGTT 118617 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 |||| || ||| || ||||| | | |||| ||||| | || ||||||||| Sbjct 118618 CTGGAAACTTACAACCTCATGTCGAGCAAGTTCTTCACTCACGCCTCTCCTACCCTCTTC 118677 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| ||||| || || || | || || ||| | | | | ||||| || Sbjct 118678 AACGCCGGTACCCCTCAGCCTCAGCTTTCTTCCTGCTTCTTGGTAGACATGAAGGAAGAC 118737 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 ||| | || || || | || |||| ||||| ||||| ||| ||| ||| Sbjct 118738 AGTATCGAAGGTATCTATGATACCCTCAAGACCTGTGCTATGATCTCCAAGATGGCGGGT 118797 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAA 111909 |||||||| | || ||| | || | || | | || || || || || || | Sbjct 118798 GGTATCGGTCTCAACGCCCACCGTATCCGTGCTA-CTGGT-TCCTACATTGCCGGCACCA 118855 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | ||| || | || ||| |||| ||||| || || || ||| ||| || || || | Sbjct 118856 ACGGTACCTCGAACGGCATTGTTCCTATGCTGCGTGTCTTCAACAACACTGCTCGTTACG 118915 Query 111970 TAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCATGGC 112023 | | || | ||| | |||| || || | || | || || ||||| |||| Sbjct 118916 TCGATCAGGGTGG---TAACAAGCGTCCTGGTGCTTTTGCCATTTACCTGGAGCCGTGGC 118972 Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083 |||| ||| | | ||||||||||| | || ||||| ||| | |||||| || Sbjct 118973 ACGCTGATGTGTTTGAGTTCCTTGACCTCCGGAAGAACCACGGTAAGGAGGAGATTCGCG 119032 Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 ||||||| | ||| || || ||||| || ||| | ||||||||| | |||||| ||| Sbjct 119033 CCCGCGATTTGTTCCTTGCCCTGTGGATCCCCGATTTGTTCATGAAGCGTGTTGAGAAGA 119092 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTG 112203 ||| | ||| | ||| | || || || || || || | | ||| | |||| Sbjct 119093 ACGGCGAATGGACCCTCATGTGCCCCAACGAGTGCCCTGGCTTAGCTGATTGCTACGGTG 119152 Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAG---GAAGAAAGTCGGGCGACTGCGACGG 112260 |||| ||||| || ||||||| ||||||||| |||| | || || || || || Sbjct 119153 AGGAATTTGAGGCTCTCTACATCAAGTACGAGCGGGAAGGACGT-GGCCGTCTT--ACCA 119209 Query 112261 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | ||| | || | ||||| | |||||||| | |||| || |||||||||| || Sbjct 119210 TCAAGGCT-CAGAAGCTGTGGTATGCTATTCTGGAAGCTCAGACTGAGACTGGTAACCCT 119268 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | ||| | ||||| || ||| |||| |||||||| || ||||| |||| || Sbjct 119269 TTCATGTTGTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAACCTGGGAACCATT 119328 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 ||||||||||| || || || || | || | | |||||| |||||| Sbjct 119329 CGCAGTTCCAACCTTTGCACTGAGATTATCGAGTACTGCGCTCCTGATGAGGTCGCTGTG 119388 Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTGA 112498 || ||| | || || |||||||||| ||||| || | || |||| | | || Sbjct 119389 TGCAACTTGGCGTCGGTCGCTCTCCCTGCCTATGTTGACTACACCAACAACTGC-TACGA 119447 Query 112499 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGA 112558 | | || || ||||| || || || ||| ||| | ||| | | ||||| Sbjct 119448 CTTCCAGAAGCTGCACGATGTCACCAAGGTTGTTGTCCGCAACTTGAACCGTATCATTGA 119507 Query 112559 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 112618 | || ||||| |||| || || || || ||| | |||||||| ||||| Sbjct 119508 TGTGAACCACTACCCTGTTGTCGAGGCCCGGAACAGCAACATGCGTCACCGTCCCATTGG 119567 Query 112619 TCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGA 112678 | | |||||||| ||||| || |||| ||| | |||| | ||||| || | Sbjct 119568 TGTTGGTGTCCAGGGTCTGGCCGATGCCTTCCTGGCCCTTCGCATGCCTTTTGAGTCTGC 119627 Query 112679 CGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGC 112738 ||| || | |||| || || |||||||| || || ||||| || || || || Sbjct 119628 CGAGGCTCGTCAGCTCAACAAGCAGATCTTTGAGACCATTTACCACGCTGCCCTGGAAGC 119687 Query 112739 GAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTC 112798 | || | || | ||||| ||||| || |||| ||||| ||||| | || Sbjct 119688 TTCATGCGACATCGCCGCTGTTGAAGGTCCTTACTCGACCTACGAGGGCTCTCCTGTCTC 119747 Query 112799 ACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCAC---TACGACTG 112855 || || | ||||| || || ||||||| | || | || || | || | || || Sbjct 119748 CCAGGGTATCCTTCAGTTCGACATGTGGG-ATGTCACCCCCAG--TGACCTGTGGGATTG 119804 Query 112856 GGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACC 112915 | || |||| || || | |||||| |||| ||| |||| ||| || | |||| || Sbjct 119805 GAACTCTCTGAAAGAGCAGATCAAGCAGAACGGTGTTCGCAACTCGCTGCTTGTGGCGCC 119864 Query 112916 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975 ||||| || ||||| || | || || ||||||| || || ||||| || || ||||| Sbjct 119865 CATGCCCACTGCCTCAACTTCCCAGATTCTGGGTAACAACGAGTGCTTCGAGCCTTACAC 119924 Query 112976 GACGAACATCTA 112987 | ||||| || Sbjct 119925 TTCAAACATTTA 119936 >seq236 Length=225512 Score = 129 bits (142), Expect = 7e-25 Identities = 212/303 (70%), Gaps = 6/303 (2%) Strand=Plus/Minus Query 102032 GGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCT 102091 |||||| ||| | || || |||| || |||||||| |||| || | | || Sbjct 197085 GGAGACCTACTCTTTGCTGATCGACACCTACATTAAGGAGCCTGCTCAGCGCACATACCT 197026 Query 102092 CTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTG 102151 ||| | ||||| | || |||| || |||| || || || ||||| ||||||| Sbjct 197025 CTTCAACGCCATTGACACTATTCCCTGCATTCGCCGCAAGGCCGACTGGGCCCTGAAGTG 196966 Query 102152 GTTTGAT-ACAA--AGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208 | || | |||| ||||| || ||||| |||| || | || ||||| |||||| Sbjct 196965 GATTACTGACAAGGAGTCGACTT---TTGCTCAGCGTCTTGTTGCCTTTGCCGCTGTTGA 196909 Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268 ||||||||||||||||||| | || | | || | |||||| ||||| ||| | || Sbjct 196908 GGGTATCTTCTTCTCTGGTGCTTTTGCCTCCATCTTTTGGCTGCGCAAGCGTGGTATGAT 196849 Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 102328 ||| ||| | |||||||||||||||||||||||||| ||||| || ||| || || Sbjct 196848 GCCCGGTTTGACTTTCTCCAACGAGCTTATCTCTCGTGATGAGGGTCTTCACACGGACTT 196789 Query 102329 TGC 102331 ||| Sbjct 196788 TGC 196786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738923842560