Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq405 206 3e-48
seq236 87.8 2e-12
>seq405
Length=464752
Score = 206 bits (228), Expect = 3e-48
Identities = 934/1465 (64%), Gaps = 43/1465 (3%)
Strand=Plus/Minus
Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994
|| ||||| | ||||| || || ||||| || || ||||||| || || | || |||
Sbjct 119936 TAAATGTTTGAAGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGAATCTGGGAAGTTGAG 119877
Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054
|| || ||||| || |||| | || ||| |||| ||| || | |||||| | ||
Sbjct 119876 GCAGTGGGCATGGGCGCCACAAGCAGCGAGTTGCGAACACCGTTCTGCTTGATCTGCTCT 119817
Query 106055 TTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112
|| ||| | ||| || | | | | || || | || | ||||||| || || ||||
Sbjct 119816 TTCAGAGAGTTCCAATCCCACAGGTCA-CTGGGGGTGACAT-CCCACATGTCGAACTGAA 119759
Query 106113 GCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCA 106172
| | || ||||| ||||| ||||| | ||| || | ||||| | | || |
Sbjct 119758 GGATACCCTGGGAGACAGGAGAGCCCTCGTAGGTCGAGTAAGGACCTTCAACAGCGGCGA 119699
Query 106173 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 106232
|| || || ||||||| ||||| || ||||| |||||||| | || | ||
Sbjct 119698 TGTCGCATGAAGCTTCCAGGGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAGCT 119639
Query 106233 CCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAG 106287
|| || | || ||||| |||| || | || || |||| || ||
Sbjct 119638 GACGAGCCTCGGCAGACTCAAAAGGCATGCGAAGGGCCAGGAAGG-----CATCGGCCAG 119584
Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAAC 106347
||| || ||||| | |||||| || | ||| ||||| || || || || ||||
Sbjct 119583 ACCCTGGACACCAACACCAATGGGACGGTGACGCATGTTGCTGTTCCGGGCCTCGACAAC 119524
Query 106348 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 106407
|| || || ||||||| ||||| | || | ||||| ||| |||| ||
Sbjct 119523 AGGGTAGTGGTTCACATCAATGATACGGTTCAAGTTGCGGACAACAACCTTGGTGACATC 119464
Query 106408 ATGAAGTTTTTCATAATCAAA--AGT-GCGAGTCTCTTCATTGACATACTTTGGAAGGGC 106464
|| || || | | || | ||| | || | ||| ||||| || || ||
Sbjct 119463 GTGCAGCTTCTGGAAGTCGTAGCAGTTGTTGGTGTAGTCA---ACATAGGCAGGGAGAGC 119407
Query 106465 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 106524
|| || ||||| ||||| ||||| |||||| | | |||||| | ||| || ||
Sbjct 119406 GACCGACGCCAAGTTGCACACAGCGACCTCATCAGGAGCGCAGTACTCGATAATCTCAGT 119347
Query 106525 ACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGC 106584
|| | ||||||||| ||| || |||| ||||| ||||||||||| ||||||
Sbjct 119346 GCAAAGGTTGGAACTGCGAATGGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTG 119287
Query 106585 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644
||||||||| | |||| | || | || ||||| ||||| | | ||||| || | |||
Sbjct 119286 ATCCTTGTACAACATGAAAGGGTTACCAGTCTCAGTCTGAGCTTCCAGAATAGCATACCA 119227
Query 106645 CA-CATCGGCGGCTGGTACAATGGC--GTTGGCC-CGTCCCTCCGCCTCGTACTTTGTGT 106700
|| | || | | || | |||| | |||| ||||| ||| ||||||||| |||
Sbjct 119226 CAGCTTCTGAGCCTTG----ATGGTAAGACGGCCACGTCCTTCCCGCTCGTACTTGATGT 119171
Query 106701 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 106760
|||| || ||||| |||||||| || | | || || || || || || |
Sbjct 119170 AGAGAGCCTCAAATTCCTCACCGTAGCAATCAGCTAAGCCAGGGCACTCGTTGGGGCACA 119111
Query 106761 AAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 106820
|| | ||||| || || |||||| ||||||||||| | || || ||||||||||
Sbjct 119110 TGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAACAAATCGGGGATCCACAGGG 119051
Query 106821 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880
|| | ||| | ||| ||| || | ||| ||||| || | |||||||
Sbjct 119050 CAAGGAACAAATCGCGGGCGCGAATCTCCTCCTTACCGTGGTTCTTCCGGAGGTCAAGGA 118991
Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC- 106939
|||| | | ||| |||||||| ||||| || || | || | || || |||||
Sbjct 118990 ACTCAAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACC---AGGACGCT 118934
Query 106940 -----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 106994
||| | |||| || || || || ||| ||| || || || ||||| |||| ||
Sbjct 118933 TGTTACCACCCTGATCGACGTAACGAGCAGTGTTGTTGAAGACACGCAGCATAGGAACAA 118874
Query 106995 TACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGA 107054
| || | || ||| || || || ||| || | | || | | | |||
Sbjct 118873 TGCCGTTCGAGGTACCGTTGGTGCCGGCAATGTAGGAACCAGTAGCACGGATACGGTGGG 118814
Query 107055 TGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCAT 107114
|| | || ||||| || ||| ||| ||||| ||||| | | || || |||
Sbjct 118813 CGTTGAGACCGATACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATCAT 118754
Query 107115 AGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC 107174
||||||| | ||| ||| ||||| || | | | |||||| || | ||| ||
Sbjct 118753 AGATACCTTCGATACTGTCTTCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGAGGCT 118694
Query 107175 TTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACAT 107232
|| ||||| || ||||||||||| || | |||||| ||| | | |||| |||||
Sbjct 118693 GAGGGGTACCGGCGTTGAAGAGGGTAGGAGAGGCGTGAGTGA--AGAACTTGCTCGACAT 118636
Query 107233 CTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACG 107292
|| ||| || |||| ||| |||| | || || || |||| || |||||
Sbjct 118635 GAGGTTGTAAGTTTCCAGAACACGCTCAACATTATCACCCCAAATACCGACAGCAACACG 118576
Query 107293 CATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGAT-AGCTCT 107351
||||| ||||| || || || | | ||||||| ||| |||| | || ||
Sbjct 118575 CATAATCATGTGCTGAGGACGCTCGACAATCTTGCCATCAAGCTTGAGAAGGTAAGATC- 118517
Query 107352 TCTCAAGGGTTTTGAGACCAAAGTA 107376
|||| | ||| |||| ||||||||
Sbjct 118516 TCTCCAAGGTCTTGAATCCAAAGTA 118492
>seq236
Length=225512
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/206 (70%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332
|||||| ||| ||| ||||||||||| || || ||||| || || ||||| | ||
Sbjct 196785 GGCAAAGTCCGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAAACC 196844
Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392
||||| | ||| ||||| || |||| | || | | || | || |||||||||||
Sbjct 196845 GGGCATCATACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAAGCACCAGAGAAGAAGAT 196904
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT--GTCA 117450
|||||| ||| ||||| |||| ||| |||| || || | ||| | |||| || |
Sbjct 196905 ACCCTCAACAGCGGCAAAGGCAACAAGACGCTGAGCAAAAG-TCGACTCCTTGTCAGT-A 196962
Query 117451 AACCATTTCATTGCCCATTTCGCCTT 117476
| ||| |||| ||||| | |||||
Sbjct 196963 ATCCACTTCAGGGCCCAGTCGGCCTT 196988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589977496107520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |