Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq191 152 1e-31
seq438 136 9e-27
>seq191
Length=257482
Score = 152 bits (168), Expect = 1e-31
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| ||||| ||||| || ||||| ||||| |||| || || | ||||| ||
Sbjct 143425 ACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCA 143484
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| || |||||||| || |||||||| || |||||||| || ||||| |||
Sbjct 143485 AGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 143544
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || |||||||| || || || || || || | |||||
Sbjct 143545 ATCTTCGACTTGACGTTGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTG 143604
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| ||| || || || | |||||
Sbjct 143605 CCAGTCAGAGTCTTGACAAAGATCTGCAT 143633
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| ||||| || || ||||| || || || ||||| || | || || | || || ||
Sbjct 142968 AACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCCTC 143027
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||||| || |||||||| || || ||||| || |||||||| || ||||| ||
Sbjct 143028 CAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 143087
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || ||||||||| || ||||| || ||| || || ||||| || | |||||
Sbjct 143088 GATCTTGCTCTTGACGTTGTCGATGGTATCAGAAGACTCGACCTCAAGAGTGATGGTCTT 143147
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| ||| || ||||| | |||||
Sbjct 143148 GCCGGTCAGAGTCTTCACGAAGATCTGCAT 143177
Score = 122 bits (134), Expect = 2e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| | |||||| |||||||| || || || ||||| || | ||||| | ||||| ||
Sbjct 143196 AACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCCATCCTC 143255
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||||| ||||| || || || || ||||| || || || || || ||||| ||
Sbjct 143256 AAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 143315
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || ||| || || || || || ||||| || || |||||||||| |||||
Sbjct 143316 GATCTTCGACTTAACATTGTCGATAGTATCCGACGACTCGACCTCAAGGGTAATGGTCTT 143375
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| || || ||||| | |||||
Sbjct 143376 GCCGGTCAGGGTCTTGACGAAAATCTGCAT 143405
Score = 122 bits (134), Expect = 2e-22
Identities = 138/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||||||||| |||||||| || || || |||||||||| || || | ||||| ||
Sbjct 143653 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCA 143712
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||| || || || || ||||| || ||||| || || ||||| ||
Sbjct 143713 AGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGG 143772
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || |||||||| || || || || || ||||| | |||||
Sbjct 143773 ATCTTGGACTTGACATTGTCAATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTG 143832
Query 195112 CCTGT 195116
|| ||
Sbjct 143833 CCGGT 143837
>seq438
Length=409217
Score = 136 bits (150), Expect = 9e-27
Identities = 150/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||| || || || ||||| || | || || | ||||| ||
Sbjct 73267 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCCTCA 73326
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || ||||| || ||||| || || ||||| ||
Sbjct 73327 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGG 73386
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || |||||||||||| || || || ||||| | |||||
Sbjct 73387 ATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACCTCCAGGGTGATGGTCTTA 73446
Query 195112 CCTGTCAAAGTTTTTACGAA 195131
|| |||| || || |||||
Sbjct 73447 CCCGTCAGGGTCTTGACGAA 73466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109475231575616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |