Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq405 113 5e-20
>seq405
Length=464752
Score = 113 bits (124), Expect = 5e-20
Identities = 439/684 (64%), Gaps = 12/684 (2%)
Strand=Plus/Minus
Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184
||||||||| || || || || | |||| ||||| || || || || ||||| | |
Sbjct 119163 CTCAAATTCCTCACCGTAGCAATCAGCTAAGCCAGGGCACTCGTTGGGGCACATGAGGGT 119104
Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA 48244
||| || | | || | || | |||| || | ||| || ||||| || || | ||
Sbjct 119103 CCATTCGCCGTTCTTCTCAACACGCTTCATGAACAAATCGGGGATCCACAGGGCAAGGAA 119044
Query 48245 TAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCAT 48304
||||| | | | | || || || || ||| | || ||||| || || |
Sbjct 119043 CAAATCGCGGGCGCGAATCTCCTCCTTACCGTGGTTCTTCCGGAGGTCAAGGAACTCAAA 118984
Query 48305 TATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCC 48364
| |||||| ||||| || || | || || || | |||| || || || ||||| ||
Sbjct 118983 CACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGACGCTTGTTACCACC 118924
Query 48365 TTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGA 48424
||||| | || | ||||| ||||| | || | | ||| || ||||| || || ||
Sbjct 118923 CTGATCGACGTAACGAGCAGTGTTGTTGAAGACACGCAGCATAGGAACAATGCCGTTCGA 118864
Query 48425 TATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATAT--TACTAATTGAAATA 48482
|||| ||||| || | ||| || ||| |||| | ||| | |||| |
Sbjct 118863 GGTACCGTTGGTGCCGGCAATGTAGGAACCAGTAGCACGGATACGGTGGGCGTTGAGA-- 118806
Query 48483 CCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCT 48542
|| |||||||| ||||| || || || | |||||| || ||||||||||| || |||
Sbjct 118805 CCGATACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATCATAGATACCT 118746
Query 48543 TCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTT 48602
|| ||||| || || |||| | || | || || ||| | || || ||| ||
Sbjct 118745 TCGATACTGTCTTCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGAGGCTGAGGGGTA 118686
Query 48603 CCTGAATTAAATAATGTTGGAGATGCATGAATAAACCA-TTTCTCTGATAACAATTTATA 48661
|| | || || | || ||||| || ||| | || | || ||| || | | || ||
Sbjct 118685 CCGGCGTTGAAGAGGGTAGGAGAGGCGTGAGTGAAGAACTTGCTC-GACATGAGGTTGTA 118627
Query 48662 TGTTTCAATAACAGAATCTA---TATCCCATTGATGTATACCTATAGATACACGCATTAA 48718
||||| | |||| || | |||| | | ||||| | || |||||||| |
Sbjct 118626 AGTTTCCAGAACACGCTCAACATTATCACCCCAA---ATACCGACAGCAACACGCATAAT 118570
Query 48719 CATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAA 48778
||| | ||||| | || ||||| ||| || | || | ||| || ||| | |||||
Sbjct 118569 CATGTGCTGAGGACGCTCGACAATCTTGCCATCAAGCTTGAGAAGGTAAGATCTCTCCAA 118510
Query 48779 TGTTTTAAAACCAAAATAGTTGTA 48802
|| || || ||||| || | |||
Sbjct 118509 GGTCTTGAATCCAAAGTACTGGTA 118486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562105652190720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |