Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq405 248 2e-60
seq236 165 2e-35
>seq405
Length=464752
Score = 248 bits (274), Expect = 2e-60
Identities = 896/1387 (65%), Gaps = 35/1387 (3%)
Strand=Plus/Minus
Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965
||||||||| | |||||| ||||| | | ||| | | |||||||| ||||||||||||
Sbjct 119979 AGGGTTGACAACCTGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTTGAAGTGTA 119920
Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025
||||||| || ||||||||| ||||||||||| | ||| ||| ||||||||||| ||
Sbjct 119919 AGGCTCGAAGCACTCGTTGTTACCCAGAATCTGGGAAGTTGAGGCAGTGGGCATGGGCGC 119860
Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCC---A 213082
||| || || ||| | || |||| || ||| | |||| | |
Sbjct 119859 CACAAGCAGCGAGTTGCGAACACCGTTCTGCTTGATCTG---------CTCTTTCAGAGA 119809
Query 213083 GTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCC 213142
|| ||| | ||| |||||| | | || | ||||||||| ||||| | ||| ||
Sbjct 119808 GTTCCAA-TCCCA--CAGGTCACTGGGGGTGACATCCCACATGTCGAACTGAAGGATACC 119752
Query 213143 TTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCA 213202
| | || || ||||| ||| | ||||| || || | | ||| | |||||
Sbjct 119751 CTGGGAGACAGGAGAGCCCTCGTAGGTCGAGTAAGGACCTTCAACAGCGGCGATGTCGCA 119692
Query 213203 GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGC 213262
|| || | ||||||||||| ||| ||||| ||||| |||| | ||||||||| ||
Sbjct 119691 TGAAGCTTCCAGGGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAGCTGACGAGC 119632
Query 213263 CTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCC 213322
||| | ||| || ||||| | | |||| |||| ||||| |||||||| ||
Sbjct 119631 CTCGGCAGACTCAAAAGGCATGCGAAGGGCCAGGAAGGCATCGGCCAGACCCTGGACACC 119572
Query 213323 GATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTT 213382
| || ||||| | ||| | || ||| || | ||| | | ||||| |||
Sbjct 119571 AACACCAATGGGACGGTGACGCATGTTGCTGTTCCGGGCCTCGACAACAGGGTAGTGGTT 119512
Query 213383 GCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTC 213442
|| ||||| ||| | ||||||| | || |||||||||| | ||| | ||
Sbjct 119511 CACATCAATGATACGGTTCAAGTTGCGGACAACAACCTTGGTGACATCGTGCAGCTTCTG 119452
Query 213443 GTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTT 213502
| | | | || | || | ||| | |||| || |||| |||| |||
Sbjct 119451 GAAGTCGTAGCAGTTGTTGGTGTAGTCAACATAGGCAGGGAGAGCGACCGACGCCAAGTT 119392
Query 213503 GCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCA 213562
||| || || ||||| | || | |||||| || ||||| ||||| |||||| |
Sbjct 119391 GCACACAGCGACCTCATCAGGAGCGCAGTACTCGATAATCTCAGTGCAAAGGTTGGAACT 119332
Query 213563 TCGGATGGTGCCCAGGTTCTGGTGGTTTGACT-TTGCGTTGGCAGA-ATCCTTGTAGAGC 213620
|| ||||| |||||||||| ||||| ||| ||||| | |||| ||||||||| | |
Sbjct 119331 GCGAATGGTTCCCAGGTTCTTCTGGTT--ACTCTTGCGGTTGCAGTGATCCTTGTACAAC 119274
Query 213621 ATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCC 213680
||| | ||| || ||||| ||| | |||| || ||| || | | |||
Sbjct 119273 ATGAAAGGGTTACCAGTCTCAGTCTGAGCTTCCAGAATAGCATACCACAGCTTCTGAGCC 119214
Query 213681 TTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAA 213739
|||| | ||| || || | | | |||||||| |||||| | | ||
Sbjct 119213 TTGATG----GTAAGACGGCCACGTCCTTCCCGCTCGTACTTGATGTAGAGAGCCTCAAA 119158
Query 213740 TTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGT 213798
||| | || || | | | || || || || ||| ||||||||| |||| |
Sbjct 119157 TTCCTCACCGTAGCAATCAGCTAAG-CCAGGGCACTCGTTGGGGCACATGAGGGTCCATT 119099
Query 213799 CCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGG 213857
| |||| | |||| || | || |||||||| || |||| |||||| || |||||
Sbjct 119098 CGCCGTTCTTCTCA-ACACGCTTCATGAACAAATCGGGGATCCACAGGGCAAGGAACAAA 119040
Query 213858 TCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATG 213917
|| | || | |||| ||| || ||| || || || || || || ||||| |
Sbjct 119039 TCGCGGGCGCGAATCTCCTCCTTACCGTGGTTCTTCCGGAGGTCAAGGAACTCAAACACA 118980
Query 213918 TCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGG 213974
|| |||||||||||||||| ||| |||||||| || || || | |||| || |||||
Sbjct 118979 TCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGACGCTTGTTACCACCCTGA 118920
Query 213975 TCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT 214034
|| || | || ||||||||| ||||| | || || | ||||| ||
Sbjct 118919 TCGACGTAACGAGCAGTGTTGTTGAAGACACGCAGCATAGGAACAATGCCGTTCGAGGTA 118860
Query 214035 CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCTCATGGAGAGCCCTA 214092
|||||||| || || || || || || | || | | | || | | |||| || |
Sbjct 118859 CCGTTGGTGCCGGCAATGTAGGAACCAGTAGCACGGATACGGTGGGCGTTGAGA--CCGA 118802
Query 214093 TGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCA 214152
| ||||| || |||||||||||| || ||| | | | || || ||| || | |
Sbjct 118801 TACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATCATAGATACCTTCGA 118742
Query 214153 TGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAG 214212
| ||||| || | | || | |||||||||| || ||||| ||| | | || |
Sbjct 118741 TACTGTCTTCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGAGGCTGAGGGGTACCGG 118682
Query 214213 AGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCT 214272
|||||| || || || ||| || | | |||||| | || | ||| |||| || |
Sbjct 118681 CGTTGAAGAGGGTAGGAGAGGCGTGAGTGAAGAACTTGCTCGACATGAGGTTGTAAGTTT 118622
Query 214273 CCAGGAC 214279
|||| ||
Sbjct 118621 CCAGAAC 118615
>seq236
Length=225512
Score = 165 bits (182), Expect = 2e-35
Identities = 482/735 (66%), Gaps = 17/735 (2%)
Strand=Plus/Plus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
||||| || | || | ||||| |||||||| ||||| || | | ||||||||||||
Sbjct 196495 TGGTAATCAGCAACACGCTTCTCGAAGAAGTTGGTCTTTCCACCAAGAGAGATGTTCTCC 196554
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTT-CCAGCAG 47958
|||||| ||||||||||| | || |||||| |||| || | |||| ||
Sbjct 196555 ATGAAGTCGAAGGGGTTGGTGGCCTTGTACACCT-TGTCGTTACCGAGAGCGACCAGAAG 196613
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018
| || |||||| |||||||||| || ||||||| ||||| || | || |
Sbjct 196614 ACGGTCGGCGACGAACTCGATGTAGGTTTTCATGAGGTCAGCATTCATACCGAGAAGAGC 196673
Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078
||| | ||||| || || ||||||||||| || ||||| || | || |
Sbjct 196674 GCAGGGAAGAGCCTCGGTAAGGAACTCCTTCTCAATGACGACGGCATCAGTGATGATGTC 196733
Query 48079 CTT----AAC-GCGGGACTCTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132
|| ||| || | ||| || | ||||| |||||| | | || | |||
Sbjct 196734 CTGGATCAACTGCTTG---CTGGGGCGGTTGTT---CAGGTGAGAGAAA---AGAAGGCA 196784
Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192
|||||||||| |||| | || || || || ||| ||| |||||||||| | |||
Sbjct 196785 GGCAAAGTCCGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAAACC 196844
Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252
||||| | || | || ||||| || || | || |||| ||||||||||||||
Sbjct 196845 GGGCATCATACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAAGCACCAGAGAAGAAGAT 196904
Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312
||||| || || || || || || | || | |||| | | |||||| | ||
Sbjct 196905 ACCCTCAACAGCGGCAAAGGCAACAAGACGCTGAGCAAAAGTCGACTCCTTGTCAGTAAT 196964
Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372
||| || |||||||| ||||| ||||| || || || || ||||| |||
Sbjct 196965 CCACTTCAGGGCCCAGTCGGCCTTGCGGCGAATGCAGGGAATAGTGTCAATGGCGTTGAA 197024
Query 48373 GAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTC 48432
||| | ||| || | | | ||| || ||||| || |||| | ||| ||||
Sbjct 197025 GAGGTATGTGCGCTGAGCAGGCTCCTTAATGTAGGTGTCGATCAGCAAAGAGTAGGTCTC 197084
Query 48433 AGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTG 48492
||||| | ||||| || ||||||||| ||||| ||| | ||| || | |||
Sbjct 197085 CGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCAACGGGCTTCGGGGATCTG 197144
Query 48493 CACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552
|| || | ||||| | ||| | || ||||| ||||| || || || || || || ||
Sbjct 197145 GACCTCAGCAGAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCGGCGAA 197204
Query 48553 GAAGGCAAGGACATG 48567
||||||||| || ||
Sbjct 197205 GAAGGCAAGAACGTG 197219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931527583416320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |