Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq405 201 2e-46
seq236 143 5e-29
>seq405
Length=464752
Score = 201 bits (222), Expect = 2e-46
Identities = 999/1581 (63%), Gaps = 60/1581 (4%)
Strand=Plus/Minus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || || ||||| || || | | ||| | | |||||| | ||| |||||| | ||
Sbjct 119976 GTTGACAACCTGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTTGAAGTGTAAGG 119917
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| || ||||||||| ||||| ||||| | || ||| ||||||||||| |||||
Sbjct 119916 CTCGAAGCACTCGTTGTTACCCAGAATCTGGGAAGTTGAGGCAGTGGGCATGGGCGCCAC 119857
Query 221236 CAGCAGACTGTTGCGCAGTCCGAATCTA-TTGATGGACTTTCTCAGCGTGTTCCAGTCAC 221294
||||| |||||| | ||| ||| ||||| || | |||| | |||||| || |
Sbjct 119856 AAGCAGCGAGTTGCGAACACCGT-TCTGCTTGATCTGCTCTTTCAGAGAGTTCCAATCCC 119798
Query 221295 AGTGTCCTCCCAGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAG 221354
| |||||| | |
Sbjct 119797 A---------CAGGTCACTGGGGGTGACATCCCACATGTCGAACTGAAGGATACCCTGGG 119747
Query 221355 ACACCGGACTCCCATCGTACGACTCGTAGGGACCGT--ACAGTTCGGCCTGGGCGCAAGA 221412
| || ||| || ||||| | | ||| ||||| | |||| |||| | |||| ||
Sbjct 119746 AGACAGGAGAGCCCTCGTAGGTCGAGTAAGGACCTTCAACAG--CGGCGATGTCGCATGA 119689
Query 221413 CTGCGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCC 221470
|| || |||||||||||||| ||||||||||||||| ||||||||| || | |||
Sbjct 119688 A-GCTTCCAGGGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAG-CTGACGAGCC 119631
Query 221471 TCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCG 221530
|||| ||| || ||||| || || | | ||| | |||||||| ||||| || ||
Sbjct 119630 TCGGCAGACTCAAAAGGCATGCGAAGGGCCAGGAAGGCATCGGCCAGACCCTGGACACCA 119571
Query 221531 ATACCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGT 221588
| ||| ||||| | ||| | | ||||| | ||| || || || || || ||
Sbjct 119570 ACACCAATGGGACGGTGACGCATGTTGCTGTTCCGG--GCCTCGACAACAGGGTAGTGGT 119513
Query 221589 TGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCT 221648
| || || || | | ||| | ||| | | || || || ||| ||||||||
Sbjct 119512 TCACATCAATGATACGGTTCAAGTTGCGGACAACAACCTTGGTGACATCGTGCAGCTTCT 119453
Query 221649 GGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAA 221708
|| || ||| || || || | | || ||| | || || || |
Sbjct 119452 GG------------AAGTCGTAGCAGTTGTTGGTGTAGTCAACATAGGCAGGGAGAGCGA 119405
Query 221709 CGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTAC 221768
| |||| ||| ||||| || ||||| || | |||| || ||||| || |
Sbjct 119404 CCGACGCCAAGTTGCACACAGCGACCTCATCAGGAGCGCAGTACTCGATAATCTCAGTGC 119345
Query 221769 AGAGGTTGCTGCACTTG--ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGC 221826
| |||||| | ||| ||||| ||||||| || || ||| |||||| ||| |||
Sbjct 119344 AAAGGTTG--GAACTGCGAATGGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTG-CAGT 119288
Query 221827 G-TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCC 221885
| |||||||| | ||| || || |||||||| |||||| ||||||| | ||
Sbjct 119287 GATCCTTGTACAACATGAAAGGGTTACCAGTCTCAGTCTGAGCTTCCAGAATAGCATACC 119228
Query 221886 AGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTT-TCATACCCGGT 221943
| || | |||| || | | || ||| || | || || || ||| | |
Sbjct 119227 ACAGCT-TCTGAGCCTTGATGGTAA----GACGGCCACGTCCTTCCCGCTCGTACTTGAT 119173
Query 221944 ATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACA 222003
||||| ||||| | |||||||| || | | ||| || ||| | ||| ||
Sbjct 119172 GTAGAGAGCCTCAAATTCCTCACCGTAGCAATCAGCTAAGCCAGGGCACTCGTTGGGGCA 119113
Query 222004 CATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAG 222063
||| || |||| | ||| | | || | || |||||| | || |||||||||||
Sbjct 119112 CATGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAACAAATCGGGGATCCACAG 119053
Query 222064 CGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAA 222123
|| | || | ||| | || || ||||||| |||| ||| |||| || || |
Sbjct 119052 GGCAAGGAACAAATCGCGGGCGCGAATCTCCTCCTTACCGTGGTTCTTCCGGAGGTCAAG 118993
Query 222124 AAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTT 222183
|||||||| | |||||||||||||||||||| || | ||| | ||| || || |||||
Sbjct 118992 GAACTCAAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGACGCTT 118933
Query 222184 GTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCA 222242
||| ||||||||||| | | | ||| | |||||||| || || | || || |
Sbjct 118932 GTTACCACCCTGATCGA-CGTAACGAGCAGTGTTGTTGAAGACACGCAGCATAGGAACAA 118874
Query 222243 GTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--- 222299
||||| || |||||||||||| |||||| | ||| || | || |||
Sbjct 118873 TGCCGTTCGAGGTACCGTTGGTGCCGGCAATGTAGGAACCAGTAGCAC---GGATACGGT 118817
Query 222300 TGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGT 222359
||| | ||||||||||| || || |||||||| || ||| ||||||| || |
Sbjct 118816 GGGCGTTGAGACCGATACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTAT 118757
Query 222360 CCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG 222419
| ||| || || ||| ||| ||||| | || | || || || || || | |||||
Sbjct 118756 CATAGATACCTTCGATACTGTCTTCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGAG 118697
Query 222420 ATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACA 222479
| | || || |||||| || || || ||| |||||| || ||| | || ||||
Sbjct 118696 GCTGAGGGGTACCGGCGTTGAAGAGGGTAGGAGAGGCGTGAGTGAAGAACTTGCTCGACA 118637
Query 222480 TCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATC 222539
| || | ||| || || | || | | | || || || ||| | || |
Sbjct 118636 TGAGGTTGTAAGTTTCCAGAACACGCTCAACATTATCACCCCAAATACCGACAGCAACAC 118577
Query 222540 TCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGA 222597
||| ||||| ||| || | ||| ||| || | |||| |||| ||||| ||
Sbjct 118576 GCATAATCATGTGCTGAGGACGCTCGACAATCTTGCCATCAAGCTTGAGA--AGGTAAGA 118519
Query 222598 TTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGC 222657
| | |||| |||||||| |||||||| | | || ||||| | | | | || | |||
Sbjct 118518 TCTCTCCAAGGTCTTGAATCCAAAGTACTGGTAGTTGAAGTCGCGGTCATATACAATGGC 118459
Query 222658 GGCGTCCAGCTCCGACTTGTG 222678
| ||||||||| ||||||
Sbjct 118458 CGAGTCCAGCTCTTCCTTGTG 118438
>seq236
Length=225512
Score = 143 bits (158), Expect = 5e-29
Identities = 384/573 (67%), Gaps = 17/573 (3%)
Strand=Plus/Minus
Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533
|| || ||| | |||||||||||||| | ||| |||||||||||| |||||||||
Sbjct 197342 GAGATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATTGAT 197283
Query 25534 CTGGCCAAGGACATGGACGGCTGG--TACGCTC-TATCCAAAGACGAGCAGCATTTTCTC 25590
|| | ||||| | ||| |||| || | | | | || || |||||| || ||
Sbjct 197282 CTTTCTAAGGATCTTCACGACTGGAATAACCGCATGACTAAGGATGAGCAGTTCTTCATC 197223
Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650
|||| | || ||||| || |||||||| ||||| || |||||||| || ||||
Sbjct 197222 TCTCACGTTCTTGCCTTCTTCGCCGCCTCTGACGGTATTGTCAACGAGAACTTGGTCGAG 197163
Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710
| ||| | || || ||| | || ||| || || ||||||||||||||
Sbjct 197162 CGTTTCTCTGCTGAGGTCCAGATCCCCGAAGCCCGTTGCTTTTACGGTTTCCAGATCATG 197103
Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTC 25770
|| || || | ||||| ||| || | ||| | || ||||||| ||
Sbjct 197102 ATGGAGAACATTCACTCGGAGACCTACTCTTTGCTGATCGACACCTACATTAAGGAGCCT 197043
Query 25771 GCCGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAGG 25828
|| || | | || || || ||||| || ||| || ||| |||| | ||||
Sbjct 197042 GCTCAGCGCACATAC-CTCTTCAACGCCATTGA-CACTATTCCCTGCATTCGCCGCAAGG 196985
Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTA 25887
| |||||| |||||||||| | | | || | | | || |||| |||| || ||
Sbjct 196984 CCGACTGGGCCCTGAAGTGGATTA-CTGACAAGGAGTCGACTTTTGCTCAGCGTCTTGTT 196926
Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947
|||||||| ||||| ||||| ||||| ||| ||| | ||||| ||||||| |||||
Sbjct 196925 GCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGTGCTTTTGCCTCCATCTTTTGGCT- 196867
Query 25948 AAGCAGAAG---GGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGA 26003
|| ||| || | |||||||| || ||||| ||||||||||| ||| | ||
Sbjct 196866 --GCGCAAGCGTGGTATGATGCCCGGTTTG-ACTTTCTCCAACGAGCTTATCTCTCGTGA 196810
Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCT 26036
|||||||| |||| || ||||||||||| ||
Sbjct 196809 TGAGGGTCTTCACACGGACTTTGCCTGCCTTCT 196777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928839598469120
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