Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq405 196 6e-45
seq236 87.8 2e-12
>seq405
Length=464752
Score = 196 bits (216), Expect = 6e-45
Identities = 934/1468 (64%), Gaps = 45/1468 (3%)
Strand=Plus/Plus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCT-ATCTTCAACGGCTCGATGGCATCCTCAT 75204
|||||||| |||| ||| | |||| || || | |||| ||| ||||||| | |
Sbjct 118492 TACTTTGGATTCAAGACCTTGGAGA-GATCTTACCTTCTCAAGCTTGATGGCAAGATTGT 118550
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
|| || ||| ||||| | ||||| || || |||| || || || | ||||
Sbjct 118551 CGAGCGTCCTCAGCACATGATTATGCGTGTTGCTGTCGGTATTTGGGGTGATAATGTTGA 118610
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 75322
||| |||| || ||| || ||||| |||| | | ||| |||||| | ||
Sbjct 118611 GCGTGTTCTGGAAACTTACAACCTCATGTCGAGCAAGTTCT--TCACTCACGCCTCTCCT 118668
Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382
||||||||||| || ||||| || || ||| | || |||||| | | | ||
Sbjct 118669 ACCCTCTTCAACGCCGGTACCCCTCAGCCTCAGCTTTCTTCCTGCTTCTTGGTAGACATG 118728
Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442
||||| ||| ||| | |||||||||| || || | | ||||| ||||| |||
Sbjct 118729 AAGGAAGACAGTATCGAAGGTATCTATGATACCCTCAAGACCTGTGCTATGATCTCCAAG 118788
Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502
||| || ||||| || | || ||| | | | || | | || |||
Sbjct 118789 ATGGCGGGTGGTATCGGTCTCAACGCCCACCGTATCCGTGCTACTGGTTCCTACATTGCC 118848
Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562
|| || || ||| || | || ||| |||| ||||| || || || ||| ||| ||
Sbjct 118849 GGCACCAACGGTACCTCGAACGGCATTGTTCCTATGCTGCGTGTCTTCAACAACACTGCT 118908
Query 75563 CGCTATGTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAA 75616
|| || || |||| ||| || |||| | || | | || | ||| ||||
Sbjct 118909 CGTTACGTCGATCA---GGGTGGTAACAAGCGTCCTGGTGCTTTTGCCATTTACCTGGAG 118965
Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676
|| ||||| || ||| | | ||||||||||| | || ||||| ||| | || |||
Sbjct 118966 CCGTGGCACGCTGATGTGTTTGAGTTCCTTGACCTCCGGAAGAACCACGGTAAGGAGGAG 119025
Query 75677 GCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736
||| | ||| | || |||||||||| || || | ||||||||||| |||
Sbjct 119026 ATTCGCGCCCGCGATTTGTTCCTTGCCCTGTGGATCCCCGATTTGTTCATGAAGCGTGTT 119085
Query 75737 GAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796
||| || || ||||| | || | || || || || || || | | ||
Sbjct 119086 GAGAAGAACGGCGAATGGACCCTCATGTGCCCCAACGAGTGCCCTGGCTTAGCTGATTGC 119145
Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG 75856
|||||||| ||||| || ||||||| ||||| || ||| || | | | ||
Sbjct 119146 TACGGTGAGGAATTTGAGGCTCTCTACATCAAGTACGAGCGGGAAGGACGTGGC----CG 119201
Query 75857 ACTGTACCAGC----CGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTG 75911
|| ||||| | | | || | | ||| | |||||||| || | ||||| |||||||
Sbjct 119202 TCT-TACCATCAAGGCTCAGAAGCTGTGGTATGCTATTCTGGAAGCTCAGACTGAGACTG 119260
Query 75912 GAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGG 75971
| | || | ||| | ||||||||| || ||| ||||||||||| ||||| |||
Sbjct 119261 GTAACCCTTTCATGTTGTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAACCTGG 119320
Query 75972 GAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGA 76031
|||| || || || || |||||||| || ||| | |||||| | | ||||||
Sbjct 119321 GAACCATTCGCAGTTCCAACCTTTGCACTGAGATTATCGAGTACTGCGCTCCTGATGAGG 119380
Query 76032 CGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGC- 76090
||||| ||||| ||||| || |||| || || ||||| ||| | || |
Sbjct 119381 TCGCTGTGTGCAACTTGGCGTCGGTCGCTCTCCCTGCCTATGT---TGACTACACCAACA 119437
Query 76091 ACT--TTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACC 76148
||| | || | | || || || || |||| ||| ||||| | || | ||||
Sbjct 119438 ACTGCTACGACTTCCAGAAGCTGCACGATGTCACCAAGGTTGTTGTCCGCAACTTGAACC 119497
Query 76149 GAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACA 76208
| ||||||| || || || |||| || || || || ||||| |||
Sbjct 119498 GTATCATTGATGTGAACCACTACCCTGTTGTCGAGGCCCGGAACAGCAACATGCGTCACC 119557
Query 76209 GACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA- 76267
| || |||||| | ||||| || ||||| || |||| || || | || ||||
Sbjct 119558 GTCCCATTGGTGTTGGTGTCCAGGGTCTGGCCGATG-----CCTTCCTGGCCCTTCGCAT 119612
Query 76268 ----TTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCA 76323
||||| || | || || || | || | |||||||| ||||| || ||
Sbjct 119613 GCCTTTTGAGTCTGCCGAGGCTCGTCAGCTCAACAAGCAGATCTTTGAGACCATTTACCA 119672
Query 76324 CGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383
||| ||||||| || || || | || | | ||||| | || ||| | ||
Sbjct 119673 CGCTGCCCTGGAAGCTTCATGCGACATCGCCGCTGTTGAAGGTCCTTACTCGACCTACGA 119732
Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT 76443
||| ||||| | ||||| || | |||||||| || ||||||| | || | || || |
Sbjct 119733 GGGCTCTCCTGTCTCCCAGGGTATCCTTCAGTTCGACATGTGGG-ATGTCACCCCCAG-T 119790
Query 76444 CAAC--TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 76501
| | | || ||| | ||| || || | |||||| |||| ||| |||| |||
Sbjct 119791 GACCTGTGGGATTGGAACTCTCTGAAAGAGCAGATCAAGCAGAACGGTGTTCGCAACTCG 119850
Query 76502 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 76561
|| | |||| || ||||| || ||||| || | || || ||||||| || || |||
Sbjct 119851 CTGCTTGTGGCGCCCATGCCCACTGCCTCAACTTCCCAGATTCTGGGTAACAACGAGTGC 119910
Query 76562 TTTGAACCATACACAACAAACATCTACC 76589
|| || || ||||| ||||||| ||||
Sbjct 119911 TTCGAGCCTTACACTTCAAACATTTACC 119938
>seq236
Length=225512
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/206 (70%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 65026 AAGGCGAAATGGGCAATGAAATGGTTTGAC--ACAAAGTCTCGCTCCTTCGCCGAGCGCC 65083
||||| | ||||| |||| ||| || || |||| | ||| | || || |||| |
Sbjct 196988 AAGGCCGACTGGGCCCTGAAGTGGATT-ACTGACAAGGAGTCGA-CTTTTGCTCAGCGTC 196931
Query 65084 TTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATT 65143
|| |||| ||||| ||| ||||||||||||||||| || | || | | || | ||
Sbjct 196930 TTGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGTGCTTTTGCCTCCATCTTTT 196871
Query 65144 GGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAG 65203
|| || ||||| ||| | ||||| || | ||||| || || ||||| || || |
Sbjct 196870 GGCTGCGCAAGCGTGGTATGATGCCCGGTTTGACTTTCTCCAACGAGCTTATCTCTCGTG 196811
Query 65204 ATGAGGGTCTCCACCAGGAGTTTGCC 65229
|||||||||| ||| ||| ||||||
Sbjct 196810 ATGAGGGTCTTCACACGGACTTTGCC 196785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596566259210240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |