Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq405 196 6e-45 seq236 87.8 2e-12 >seq405 Length=464752 Score = 196 bits (216), Expect = 6e-45 Identities = 934/1468 (64%), Gaps = 45/1468 (3%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCT-ATCTTCAACGGCTCGATGGCATCCTCAT 75204 |||||||| |||| ||| | |||| || || | |||| ||| ||||||| | | Sbjct 118492 TACTTTGGATTCAAGACCTTGGAGA-GATCTTACCTTCTCAAGCTTGATGGCAAGATTGT 118550 Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264 || || ||| ||||| | ||||| || || |||| || || || | |||| Sbjct 118551 CGAGCGTCCTCAGCACATGATTATGCGTGTTGCTGTCGGTATTTGGGGTGATAATGTTGA 118610 Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 75322 ||| |||| || ||| || ||||| |||| | | ||| |||||| | || Sbjct 118611 GCGTGTTCTGGAAACTTACAACCTCATGTCGAGCAAGTTCT--TCACTCACGCCTCTCCT 118668 Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382 ||||||||||| || ||||| || || ||| | || |||||| | | | || Sbjct 118669 ACCCTCTTCAACGCCGGTACCCCTCAGCCTCAGCTTTCTTCCTGCTTCTTGGTAGACATG 118728 Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442 ||||| ||| ||| | |||||||||| || || | | ||||| ||||| ||| Sbjct 118729 AAGGAAGACAGTATCGAAGGTATCTATGATACCCTCAAGACCTGTGCTATGATCTCCAAG 118788 Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502 ||| || ||||| || | || ||| | | | || | | || ||| Sbjct 118789 ATGGCGGGTGGTATCGGTCTCAACGCCCACCGTATCCGTGCTACTGGTTCCTACATTGCC 118848 Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 || || || ||| || | || ||| |||| ||||| || || || ||| ||| || Sbjct 118849 GGCACCAACGGTACCTCGAACGGCATTGTTCCTATGCTGCGTGTCTTCAACAACACTGCT 118908 Query 75563 CGCTATGTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAA 75616 || || || |||| ||| || |||| | || | | || | ||| |||| Sbjct 118909 CGTTACGTCGATCA---GGGTGGTAACAAGCGTCCTGGTGCTTTTGCCATTTACCTGGAG 118965 Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676 || ||||| || ||| | | ||||||||||| | || ||||| ||| | || ||| Sbjct 118966 CCGTGGCACGCTGATGTGTTTGAGTTCCTTGACCTCCGGAAGAACCACGGTAAGGAGGAG 119025 Query 75677 GCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736 ||| | ||| | || |||||||||| || || | ||||||||||| ||| Sbjct 119026 ATTCGCGCCCGCGATTTGTTCCTTGCCCTGTGGATCCCCGATTTGTTCATGAAGCGTGTT 119085 Query 75737 GAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796 ||| || || ||||| | || | || || || || || || | | || Sbjct 119086 GAGAAGAACGGCGAATGGACCCTCATGTGCCCCAACGAGTGCCCTGGCTTAGCTGATTGC 119145 Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG 75856 |||||||| ||||| || ||||||| ||||| || ||| || | | | || Sbjct 119146 TACGGTGAGGAATTTGAGGCTCTCTACATCAAGTACGAGCGGGAAGGACGTGGC----CG 119201 Query 75857 ACTGTACCAGC----CGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTG 75911 || ||||| | | | || | | ||| | |||||||| || | ||||| ||||||| Sbjct 119202 TCT-TACCATCAAGGCTCAGAAGCTGTGGTATGCTATTCTGGAAGCTCAGACTGAGACTG 119260 Query 75912 GAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGG 75971 | | || | ||| | ||||||||| || ||| ||||||||||| ||||| ||| Sbjct 119261 GTAACCCTTTCATGTTGTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAACCTGG 119320 Query 75972 GAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGA 76031 |||| || || || || |||||||| || ||| | |||||| | | |||||| Sbjct 119321 GAACCATTCGCAGTTCCAACCTTTGCACTGAGATTATCGAGTACTGCGCTCCTGATGAGG 119380 Query 76032 CGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGC- 76090 ||||| ||||| ||||| || |||| || || ||||| ||| | || | Sbjct 119381 TCGCTGTGTGCAACTTGGCGTCGGTCGCTCTCCCTGCCTATGT---TGACTACACCAACA 119437 Query 76091 ACT--TTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACC 76148 ||| | || | | || || || || |||| ||| ||||| | || | |||| Sbjct 119438 ACTGCTACGACTTCCAGAAGCTGCACGATGTCACCAAGGTTGTTGTCCGCAACTTGAACC 119497 Query 76149 GAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACA 76208 | ||||||| || || || |||| || || || || ||||| ||| Sbjct 119498 GTATCATTGATGTGAACCACTACCCTGTTGTCGAGGCCCGGAACAGCAACATGCGTCACC 119557 Query 76209 GACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA- 76267 | || |||||| | ||||| || ||||| || |||| || || | || |||| Sbjct 119558 GTCCCATTGGTGTTGGTGTCCAGGGTCTGGCCGATG-----CCTTCCTGGCCCTTCGCAT 119612 Query 76268 ----TTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCA 76323 ||||| || | || || || | || | |||||||| ||||| || || Sbjct 119613 GCCTTTTGAGTCTGCCGAGGCTCGTCAGCTCAACAAGCAGATCTTTGAGACCATTTACCA 119672 Query 76324 CGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383 ||| ||||||| || || || | || | | ||||| | || ||| | || Sbjct 119673 CGCTGCCCTGGAAGCTTCATGCGACATCGCCGCTGTTGAAGGTCCTTACTCGACCTACGA 119732 Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT 76443 ||| ||||| | ||||| || | |||||||| || ||||||| | || | || || | Sbjct 119733 GGGCTCTCCTGTCTCCCAGGGTATCCTTCAGTTCGACATGTGGG-ATGTCACCCCCAG-T 119790 Query 76444 CAAC--TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 76501 | | | || ||| | ||| || || | |||||| |||| ||| |||| ||| Sbjct 119791 GACCTGTGGGATTGGAACTCTCTGAAAGAGCAGATCAAGCAGAACGGTGTTCGCAACTCG 119850 Query 76502 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 76561 || | |||| || ||||| || ||||| || | || || ||||||| || || ||| Sbjct 119851 CTGCTTGTGGCGCCCATGCCCACTGCCTCAACTTCCCAGATTCTGGGTAACAACGAGTGC 119910 Query 76562 TTTGAACCATACACAACAAACATCTACC 76589 || || || ||||| ||||||| |||| Sbjct 119911 TTCGAGCCTTACACTTCAAACATTTACC 119938 >seq236 Length=225512 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 65026 AAGGCGAAATGGGCAATGAAATGGTTTGAC--ACAAAGTCTCGCTCCTTCGCCGAGCGCC 65083 ||||| | ||||| |||| ||| || || |||| | ||| | || || |||| | Sbjct 196988 AAGGCCGACTGGGCCCTGAAGTGGATT-ACTGACAAGGAGTCGA-CTTTTGCTCAGCGTC 196931 Query 65084 TTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATT 65143 || |||| ||||| ||| ||||||||||||||||| || | || | | || | || Sbjct 196930 TTGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGTGCTTTTGCCTCCATCTTTT 196871 Query 65144 GGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAG 65203 || || ||||| ||| | ||||| || | ||||| || || ||||| || || | Sbjct 196870 GGCTGCGCAAGCGTGGTATGATGCCCGGTTTGACTTTCTCCAACGAGCTTATCTCTCGTG 196811 Query 65204 ATGAGGGTCTCCACCAGGAGTTTGCC 65229 |||||||||| ||| ||| |||||| Sbjct 196810 ATGAGGGTCTTCACACGGACTTTGCC 196785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566259210240