Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq405 205 8e-48
seq191 98.7 9e-16
>seq405
Length=464752
Score = 205 bits (226), Expect = 8e-48
Identities = 1118/1760 (64%), Gaps = 66/1760 (4%)
Strand=Plus/Minus
Query 138286 ATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCATGTTAATTAAA 138345
||||| ||||| ||| |||||| || || || || || ||| ||||| | || | |
Sbjct 120191 ATGTTCAACGACTGAGACTGATCAATAAAGGCACCACGGTCAGCAGCCATCTGAACAACA 120132
Query 138346 TTTTTACTTTTC---ATCTCCCACACGGTCTTGTATAGATCACGAAT--ATGTC-GCGGT 138399
| || | |||||||| || |||||||| ||| || | ||||| ||||
Sbjct 120131 GT---ACGCTGAGAAATCTCCCAAACAGTCTTGTACAGA----GACTTGATGTCCGCGGG 120079
Query 138400 ATTGTTGCA-ATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATC 138458
| || || || || |||| |||||| ||| ||||||||| || |||||| |||
Sbjct 120078 AATGCTGGGGATGTTCTGAACAGAACCGTTGTCCGAAATGATGCGGTTCTTCATGTTATC 120019
Query 138459 GTTGTACAGATTCAACTTGATCAAG-TCGTTTATCAGATATCTGTTTATGACCTGAAATT 138517
||||| ||| | | |||| ||| | || | ||| | ||||| || |
Sbjct 120018 CGACCACAGAC-CAAGGTCAACAAGGTCGCGAAGCAACCAAGGGTTGACAACCTGGAACT 119960
Query 138518 CACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGT 138577
|||| ||||| || || || ||||||||| ||| ||||||| || | |||||||
Sbjct 119959 CACCAGCCAACACACGGCGCTGGTAAATGTTTGAAGTGTAAGGCTCGAAGCACTCGTTGT 119900
Query 138578 TTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTA 138637
| ||||||||||| | || | || || |||||| |||||| | || || || || |
Sbjct 119899 TACCCAGAATCTGGGAAGTTGAGGCAGTGGGCATGGGCGCCACAAGCAGCGAGTTGCGAA 119840
Query 138638 AACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTT 138697
||||| ||||||| | || || || || ||| ||||||| || || || |
Sbjct 119839 CACCGTTCTGCTTGATCTGCTCTTTCAGAGAGTTCCAATCCCACAGGTCACTGGGGGTGA 119780
Query 138698 TGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGT 138757
| |||||| ||| |||| | || ||| | ||| ||| ||||| | ||
Sbjct 119779 CATCCCACATGTCGAACTGAAGGATACCCTGGGAGACAGGAGAGCCCTCGTAGGTCGAGT 119720
Query 138758 ATACACCA--AACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGT 138815
| ||| ||| ||| | ||| || || || ||| | | |||||| ||
Sbjct 119719 AAGGACCTTCAACAGCGGCG--ATGTCGCATGAAGCTTCCAGGGCAGCGTGGTAAATGGT 119662
Query 138816 TTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCAT 138875
|| ||||||| |||||| || |||||||| ||| | |||||||| ||
Sbjct 119661 CTCAAAGATCTGCTTGTTGAGCTGACGAGCCTCGGCAGACTCAAAAGGCATGCGAAGGGC 119602
Query 138876 CGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGA 138935
| ||| || |||||||| || || || || || || | || || || |||| ||
Sbjct 119601 CAGGAAGGCATCGGCCAGACCCTGGACACCAACACCAATGGGACGGTGACGCATGTT--- 119545
Query 138936 CGCTTTTGCGG-CTTCGATA---GGATAATAGTTTACATCGATGATTTTGTTTAAATTTC 138991
||| || ||| | |||| | || || | ||| ||||| ||||| ||| || || |
Sbjct 119544 -GCTGTTCCGGGCCTCGACAACAGGGTAGTGGTTCACATCAATGATACGGTTCAAGTTGC 119486
Query 138992 GCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCG 139050
| || || ||||| || || | | | | | | || ||||| || |||| |
Sbjct 119485 GGACAACAACCTTGGTGACAT-CGTGCAGCTTCTGGAAGTCGTA---GCAGTTGTTGGTG 119430
Query 139051 TCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCG 139110
| | | || | | || || | | ||| || | ||||||||| || || ||
Sbjct 119429 TAGTCAACATAGGCAGG------GAGAGCGACCGACGCCAAGTTGCACACAGCGACCTCA 119376
Query 139111 TCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAA 139170
|| || ||| ||| |||| ||| || | || | || || || || || |
Sbjct 119375 TCAGGAGCGCAGTACTCGATAATCTCAGTGCAAAGGTTGGAACTGCGAATGGTTCCCAGG 119316
Query 139171 TTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTT 139230
|| | || || || || ||||| || ||| ||||| | ||| | || | |||||
Sbjct 119315 TTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTACAACATGAAAGGGTTACCAGTC 119256
Query 139231 TCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGACGCACGTAA 139290
|| || | || | ||| | ||| | | ||| | || | | | |
Sbjct 119255 TCAGTCTGAGCTTCCAGAATAGCATACCACAGCTTCTGAGCCTTGATGGTAAGACGGCCA 119196
Query 139291 AGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAA 139350
|| | || ||||||||||| |||||| | || ||| ||||||||| ||||
Sbjct 119195 CGTCCTTCCCGCTCGTACTTGATGTAGAGAGCCTCAAATTCCTCACCGTAGCAATCAGCT 119136
Query 139351 AGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTC 139410
| | | |||| || || |||||||| | |||| |||||||| || || ||| ||
Sbjct 119135 AAGCCAGGGCACTCGTTGGGGCACATGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTC 119076
Query 139411 ATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAA 139470
||||||| ||| || ||||||| || | | ||||||||| || | || ||| |
Sbjct 119075 ATGAACAAATCGGGGATCCACAGGGCAAGGAACAAATCGCGGGCGCGAATCTCCTCCTTA 119016
Query 139471 CCCATGTTACGTTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGAT 139528
|| ||| || | | || |||||| ||||| || ||||||||||| || ||||| |
Sbjct 119015 CCGTGGTT--CTTCCGGAGGTCAAGGAACTCAAACACATCAGCGTGCCACGGCTCCAGGT 118958
Query 139529 AGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTAT 139585
| ||||| | || || || ||| ||||| |||||||||| || ||| || |
Sbjct 118957 AAATGGCAAAAGCACCAGGACGCTTGTTACCACCCTGATCGACGTAACGAGCAGTGTTGT 118898
Query 139586 TGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG--ATG-- 139641
|||| || |||| ||| || | | ||| ||| || |||||||||| ||| |||
Sbjct 118897 TGAAGACACGCAGCATAGGAACAATGCCGTTCGAGGTACCGTTGGTGC--CGGCAATGTA 118840
Query 139642 GGA--CTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGG 139699
||| | || ||| |||| || | |||| ||||| || || | | ||||
Sbjct 118839 GGAACCAGT----AGCACGGATACGGTGGGCGTTGAGACCGATACCACCCGCCATCTTGG 118784
Query 139700 ATATTAAAACGCA-ATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATC 139758
| || | | | || || | | || || || |||||| || ||||| |||| |||
Sbjct 118783 AGATCATAGCACAGGTCTTG-AGGGTATCATAGATACCTTCGATACTGTCTTCCTTCATG 118725
Query 139759 GTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGA 139818
|||| ||||| || ||||| || || | || ||||| || || ||||||
Sbjct 118724 TCTACCAAGAAGCAGGAAGAAAGCTGAGGCTGAGGGGTACCGGCGTTGAAGAGGGTAGGA 118665
Query 139819 CTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTC--GATGGCGCTC-ACA 139875
||||| ||||| | | ||||||| | | ||| ||||| || ||||| |||
Sbjct 118664 GAGGCGTGAGTGAAGAACTTGCTCGACATGAGGTTGTAAGTTTCCAGAACACGCTCAACA 118605
Query 139876 ATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCC 139935
|||| || |||||||||| || ||||| | ||| || || || ||| |
Sbjct 118604 TTATC---ACCCCAAATACCGACAGCAACACGCATAATCATGTGCTGAGGACGCTCGACA 118548
Query 139936 ACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTA 139995
| | ||| || | || || ||| |||| | ||||||| | |||||||||
Sbjct 118547 ATCTTGCCATCAAGCTTGAGAAGGTAAGATCTCTCCAAGGTCTTGAATCCAAAGTACTGG 118488
Query 139996 TAGTTGAAATCGAGCGCATA 140015
|||||||| ||| | ||||
Sbjct 118487 TAGTTGAAGTCGCGGTCATA 118468
>seq191
Length=257482
Score = 98.7 bits (108), Expect = 9e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || ||||| || || || |
Sbjct 143633 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCCTCT 143574
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || || || || |||
Sbjct 143573 GACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAA 143514
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | |||||||| || || ||||| |||||| | | | | || || || |||
Sbjct 143513 CAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGTACCCTCTCCGACTACAAC 143454
Query 24884 ATTCAAAAGGAATCGACACTACAC 24907
||||| ||||| || || || |||
Sbjct 143453 ATTCAGAAGGAGTCTACTCTCCAC 143430
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || || || || || | |
Sbjct 143177 ATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACCATCACTCTTGAGGTCGAGTCTTCT 143118
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| ||||| || || || || || || ||
Sbjct 143117 GATACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 143058
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | |||||||| || || ||||||||||| | | | |||| || || |||
Sbjct 143057 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTGTCTGACTACAAC 142998
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || ||||| || || || ||| ||||
Sbjct 142997 ATCCAGAAGGAGTCTACCCTCCACCTGGT 142969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449895080573440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |