Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq405 205 8e-48 seq191 98.7 9e-16 >seq405 Length=464752 Score = 205 bits (226), Expect = 8e-48 Identities = 1118/1760 (64%), Gaps = 66/1760 (4%) Strand=Plus/Minus Query 138286 ATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCATGTTAATTAAA 138345 ||||| ||||| ||| |||||| || || || || || ||| ||||| | || | | Sbjct 120191 ATGTTCAACGACTGAGACTGATCAATAAAGGCACCACGGTCAGCAGCCATCTGAACAACA 120132 Query 138346 TTTTTACTTTTC---ATCTCCCACACGGTCTTGTATAGATCACGAAT--ATGTC-GCGGT 138399 | || | |||||||| || |||||||| ||| || | ||||| |||| Sbjct 120131 GT---ACGCTGAGAAATCTCCCAAACAGTCTTGTACAGA----GACTTGATGTCCGCGGG 120079 Query 138400 ATTGTTGCA-ATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATC 138458 | || || || || |||| |||||| ||| ||||||||| || |||||| ||| Sbjct 120078 AATGCTGGGGATGTTCTGAACAGAACCGTTGTCCGAAATGATGCGGTTCTTCATGTTATC 120019 Query 138459 GTTGTACAGATTCAACTTGATCAAG-TCGTTTATCAGATATCTGTTTATGACCTGAAATT 138517 ||||| ||| | | |||| ||| | || | ||| | ||||| || | Sbjct 120018 CGACCACAGAC-CAAGGTCAACAAGGTCGCGAAGCAACCAAGGGTTGACAACCTGGAACT 119960 Query 138518 CACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGT 138577 |||| ||||| || || || ||||||||| ||| ||||||| || | ||||||| Sbjct 119959 CACCAGCCAACACACGGCGCTGGTAAATGTTTGAAGTGTAAGGCTCGAAGCACTCGTTGT 119900 Query 138578 TTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTA 138637 | ||||||||||| | || | || || |||||| |||||| | || || || || | Sbjct 119899 TACCCAGAATCTGGGAAGTTGAGGCAGTGGGCATGGGCGCCACAAGCAGCGAGTTGCGAA 119840 Query 138638 AACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTT 138697 ||||| ||||||| | || || || || ||| ||||||| || || || | Sbjct 119839 CACCGTTCTGCTTGATCTGCTCTTTCAGAGAGTTCCAATCCCACAGGTCACTGGGGGTGA 119780 Query 138698 TGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGT 138757 | |||||| ||| |||| | || ||| | ||| ||| ||||| | || Sbjct 119779 CATCCCACATGTCGAACTGAAGGATACCCTGGGAGACAGGAGAGCCCTCGTAGGTCGAGT 119720 Query 138758 ATACACCA--AACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGT 138815 | ||| ||| ||| | ||| || || || ||| | | |||||| || Sbjct 119719 AAGGACCTTCAACAGCGGCG--ATGTCGCATGAAGCTTCCAGGGCAGCGTGGTAAATGGT 119662 Query 138816 TTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCAT 138875 || ||||||| |||||| || |||||||| ||| | |||||||| || Sbjct 119661 CTCAAAGATCTGCTTGTTGAGCTGACGAGCCTCGGCAGACTCAAAAGGCATGCGAAGGGC 119602 Query 138876 CGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGA 138935 | ||| || |||||||| || || || || || || | || || || |||| || Sbjct 119601 CAGGAAGGCATCGGCCAGACCCTGGACACCAACACCAATGGGACGGTGACGCATGTT--- 119545 Query 138936 CGCTTTTGCGG-CTTCGATA---GGATAATAGTTTACATCGATGATTTTGTTTAAATTTC 138991 ||| || ||| | |||| | || || | ||| ||||| ||||| ||| || || | Sbjct 119544 -GCTGTTCCGGGCCTCGACAACAGGGTAGTGGTTCACATCAATGATACGGTTCAAGTTGC 119486 Query 138992 GCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCG 139050 | || || ||||| || || | | | | | | || ||||| || |||| | Sbjct 119485 GGACAACAACCTTGGTGACAT-CGTGCAGCTTCTGGAAGTCGTA---GCAGTTGTTGGTG 119430 Query 139051 TCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCG 139110 | | | || | | || || | | ||| || | ||||||||| || || || Sbjct 119429 TAGTCAACATAGGCAGG------GAGAGCGACCGACGCCAAGTTGCACACAGCGACCTCA 119376 Query 139111 TCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAA 139170 || || ||| ||| |||| ||| || | || | || || || || || | Sbjct 119375 TCAGGAGCGCAGTACTCGATAATCTCAGTGCAAAGGTTGGAACTGCGAATGGTTCCCAGG 119316 Query 139171 TTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTT 139230 || | || || || || ||||| || ||| ||||| | ||| | || | ||||| Sbjct 119315 TTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTACAACATGAAAGGGTTACCAGTC 119256 Query 139231 TCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGACGCACGTAA 139290 || || | || | ||| | ||| | | ||| | || | | | | Sbjct 119255 TCAGTCTGAGCTTCCAGAATAGCATACCACAGCTTCTGAGCCTTGATGGTAAGACGGCCA 119196 Query 139291 AGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAA 139350 || | || ||||||||||| |||||| | || ||| ||||||||| |||| Sbjct 119195 CGTCCTTCCCGCTCGTACTTGATGTAGAGAGCCTCAAATTCCTCACCGTAGCAATCAGCT 119136 Query 139351 AGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTC 139410 | | | |||| || || |||||||| | |||| |||||||| || || ||| || Sbjct 119135 AAGCCAGGGCACTCGTTGGGGCACATGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTC 119076 Query 139411 ATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAA 139470 ||||||| ||| || ||||||| || | | ||||||||| || | || ||| | Sbjct 119075 ATGAACAAATCGGGGATCCACAGGGCAAGGAACAAATCGCGGGCGCGAATCTCCTCCTTA 119016 Query 139471 CCCATGTTACGTTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGAT 139528 || ||| || | | || |||||| ||||| || ||||||||||| || ||||| | Sbjct 119015 CCGTGGTT--CTTCCGGAGGTCAAGGAACTCAAACACATCAGCGTGCCACGGCTCCAGGT 118958 Query 139529 AGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTAT 139585 | ||||| | || || || ||| ||||| |||||||||| || ||| || | Sbjct 118957 AAATGGCAAAAGCACCAGGACGCTTGTTACCACCCTGATCGACGTAACGAGCAGTGTTGT 118898 Query 139586 TGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG--ATG-- 139641 |||| || |||| ||| || | | ||| ||| || |||||||||| ||| ||| Sbjct 118897 TGAAGACACGCAGCATAGGAACAATGCCGTTCGAGGTACCGTTGGTGC--CGGCAATGTA 118840 Query 139642 GGA--CTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGG 139699 ||| | || ||| |||| || | |||| ||||| || || | | |||| Sbjct 118839 GGAACCAGT----AGCACGGATACGGTGGGCGTTGAGACCGATACCACCCGCCATCTTGG 118784 Query 139700 ATATTAAAACGCA-ATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATC 139758 | || | | | || || | | || || || |||||| || ||||| |||| ||| Sbjct 118783 AGATCATAGCACAGGTCTTG-AGGGTATCATAGATACCTTCGATACTGTCTTCCTTCATG 118725 Query 139759 GTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGA 139818 |||| ||||| || ||||| || || | || ||||| || || |||||| Sbjct 118724 TCTACCAAGAAGCAGGAAGAAAGCTGAGGCTGAGGGGTACCGGCGTTGAAGAGGGTAGGA 118665 Query 139819 CTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTC--GATGGCGCTC-ACA 139875 ||||| ||||| | | ||||||| | | ||| ||||| || ||||| ||| Sbjct 118664 GAGGCGTGAGTGAAGAACTTGCTCGACATGAGGTTGTAAGTTTCCAGAACACGCTCAACA 118605 Query 139876 ATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCC 139935 |||| || |||||||||| || ||||| | ||| || || || ||| | Sbjct 118604 TTATC---ACCCCAAATACCGACAGCAACACGCATAATCATGTGCTGAGGACGCTCGACA 118548 Query 139936 ACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTA 139995 | | ||| || | || || ||| |||| | ||||||| | ||||||||| Sbjct 118547 ATCTTGCCATCAAGCTTGAGAAGGTAAGATCTCTCCAAGGTCTTGAATCCAAAGTACTGG 118488 Query 139996 TAGTTGAAATCGAGCGCATA 140015 |||||||| ||| | |||| Sbjct 118487 TAGTTGAAGTCGCGGTCATA 118468 >seq191 Length=257482 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || ||||| || || || | Sbjct 143633 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCCTCT 143574 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || || || ||| Sbjct 143573 GACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAA 143514 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || ||||| |||||| | | | | || || || ||| Sbjct 143513 CAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGTACCCTCTCCGACTACAAC 143454 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| ||||| || || || ||| Sbjct 143453 ATTCAGAAGGAGTCTACTCTCCAC 143430 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || || || || || | | Sbjct 143177 ATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACCATCACTCTTGAGGTCGAGTCTTCT 143118 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || || || || || Sbjct 143117 GATACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 143058 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || ||||||||||| | | | |||| || || ||| Sbjct 143057 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTGTCTGACTACAAC 142998 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || ||| |||| Sbjct 142997 ATCCAGAAGGAGTCTACCCTCCACCTGGT 142969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895080573440