Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq111 156 3e-33 seq191 89.7 4e-13 >seq111 Length=609491 Score = 156 bits (172), Expect = 3e-33 Identities = 221/311 (71%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| ||||| | |||| | |||| ||||||||| |||||| || | | ||| Sbjct 82555 GTCTCGGGGTTCTTGCATTTCTTGCACAGGACAAACTTGGTGATGAAGCCGTAGACGAGG 82496 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | ||| | ||| || || ||||||| ||| | || |||| ||| ||| Sbjct 82495 TCCTGGAGCTTCTTGTTGTCATGAGAACCGTTGATGATCCAGCGGTCGTCCTTGGGGTCG 82436 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | || || ||||| |||||| | || |||||||| | |||| | | ||||| Sbjct 82435 TTGTTGGTCTGGGCGCCAAGCTCGAAACCAAAGTACTTGATGAGGTAGGAGCCGGGACGG 82376 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 |||||| || |||||| | || | |||| || ||| |||||||| ||||||||||| Sbjct 82375 GCAAGCGACTGGGCGATCTGGGAAAGGTTGGTGACGACGGTCTTGATACCGTTGCCCTTG 82316 Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG 34620 ||||||| ||||| |||||| ||||| ||||| ||||||||| ||| | | || | Sbjct 82315 CCTTCGATCTTGGTTTGGATGCGGGGCATCTTGTACCGGTAGAACTGGTCGGTGATATCG 82256 Query 34621 CGGTTAACGTT 34631 |||| ||||| Sbjct 82255 GGGTTGACGTT 82245 >seq191 Length=257482 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || |||||||| ||| | || ||||| ||||| || |||| ||| | Sbjct 143633 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCCTCT 143574 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || ||||||| ||||| || ||| | ||| ||| ||| Sbjct 143573 GACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAA 143514 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | ||||| | ||| ||||| ||||| ||||||| | | || | | || |||||| Sbjct 143513 CAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGTACCCTCTCCGACTACAAC 143454 Query 110453 ATTCAAAAAGAATCTAC 110469 ||||| || || ||||| Sbjct 143453 ATTCAGAAGGAGTCTAC 143437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839345884864