Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq111 156 3e-33
seq191 89.7 4e-13
>seq111
Length=609491
Score = 156 bits (172), Expect = 3e-33
Identities = 221/311 (71%), Gaps = 0/311 (0%)
Strand=Plus/Minus
Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380
||||| ||||| | |||| | |||| ||||||||| |||||| || | | |||
Sbjct 82555 GTCTCGGGGTTCTTGCATTTCTTGCACAGGACAAACTTGGTGATGAAGCCGTAGACGAGG 82496
Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440
||||| | ||| | ||| || || ||||||| ||| | || |||| ||| |||
Sbjct 82495 TCCTGGAGCTTCTTGTTGTCATGAGAACCGTTGATGATCCAGCGGTCGTCCTTGGGGTCG 82436
Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500
| || || ||||| |||||| | || |||||||| | |||| | | |||||
Sbjct 82435 TTGTTGGTCTGGGCGCCAAGCTCGAAACCAAAGTACTTGATGAGGTAGGAGCCGGGACGG 82376
Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560
|||||| || |||||| | || | |||| || ||| |||||||| |||||||||||
Sbjct 82375 GCAAGCGACTGGGCGATCTGGGAAAGGTTGGTGACGACGGTCTTGATACCGTTGCCCTTG 82316
Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG 34620
||||||| ||||| |||||| ||||| ||||| ||||||||| ||| | | || |
Sbjct 82315 CCTTCGATCTTGGTTTGGATGCGGGGCATCTTGTACCGGTAGAACTGGTCGGTGATATCG 82256
Query 34621 CGGTTAACGTT 34631
|||| |||||
Sbjct 82255 GGGTTGACGTT 82245
>seq191
Length=257482
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || |||||||| ||| | || ||||| ||||| || |||| ||| |
Sbjct 143633 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCCTCT 143574
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || ||||||| ||||| || ||| | ||| ||| |||
Sbjct 143573 GACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAA 143514
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| | ||||| | ||| ||||| ||||| ||||||| | | || | | || ||||||
Sbjct 143513 CAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGTACCCTCTCCGACTACAAC 143454
Query 110453 ATTCAAAAAGAATCTAC 110469
||||| || || |||||
Sbjct 143453 ATTCAGAAGGAGTCTAC 143437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412839345884864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |