Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq191 93.3 3e-14 >seq191 Length=257482 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || ||| | || ||||| ||||| || | || ||| || Sbjct 143177 ATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACCATCACTCTTGAGGTCGAGTCTTCT 143118 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | | || || ||||| || || || ||| | ||| ||| ||| Sbjct 143117 GATACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 143058 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | ||||| | ||| ||||| ||||||||||||| | || || | ||||||||| Sbjct 143057 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTGTCTGACTACAAC 142998 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 || || ||||||||||| | ||| |||| Sbjct 142997 ATCCAGAAGGAGTCTACCCTCCACCTGGT 142969 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| ||| | || ||||| ||||| || |||| ||| | Sbjct 143633 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCCTCT 143574 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || |||||| || || || ||| | ||| ||| || Sbjct 143573 GACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAA 143514 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | ||||| | ||| ||||| ||||| ||||| | | || | | ||||||||| Sbjct 143513 CAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGTACCCTCTCCGACTACAAC 143454 Query 107736 ATTCAAAAGGAGTCTAC 107752 ||||| ||||||||||| Sbjct 143453 ATTCAGAAGGAGTCTAC 143437 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| ||||| || | || ||||| ||||||||| | || ||| | Sbjct 143405 ATGCAGATTTTCGTCAAGACCCTGACCGGCAAGACCATTACCCTTGAGGTCGAGTCGTCG 143346 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| ||| | | || || ||||| || || || || | ||| ||| ||| Sbjct 143345 GATACTATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 143286 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || |||| || ||||| ||||| ||||| | | || | ||||||||||| Sbjct 143285 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACTCTCTCGGACTACAAC 143226 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 || || |||||||| || | ||| |||| Sbjct 143225 ATCCAGAAGGAGTCCACCCTTCACTTGGT 143197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398874622132672