Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq191 118 2e-21
>seq191
Length=257482
Score = 118 bits (130), Expect = 2e-21
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| ||||| | ||| || ||||| || ||||| || || || ||||| || | | ||
Sbjct 142962 ACGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCC 143021
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||| || || || || ||||||||||| || | || || || || || || || |||||
Sbjct 143022 GTCCTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTT 143081
Query 82715 ATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773
|| || ||| ||||| || || || || || |||||| || || || || | ||| |
Sbjct 143082 GTCCTGGATC-TTGCTCTTGACGTTGTCGATGGTATCAGAAGACTCGACCTCAAGAGTGA 143140
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||||||| |||| ||||| || || ||||||||
Sbjct 143141 TGGTCTTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 143177
Score = 113 bits (124), Expect = 9e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| |||||||| || ||||| || || || || || || | | ||
Sbjct 143419 CGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGGCCA 143478
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || | ||||| || || || || || |||||
Sbjct 143479 TCCTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCCGGGGGAATGCCCTCCTTG 143538
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| |||||||| | || || || || || || ||| | || || || | ||| ||
Sbjct 143539 TCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTGATG 143598
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| |||| ||||| ||||| ||||||||
Sbjct 143599 GTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 143633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981821564311872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |