Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq405 199 4e-46
seq191 120 3e-22
seq419 104 2e-17
seq236 104 2e-17
seq438 102 8e-17
>seq405
Length=464752
Score = 199 bits (220), Expect = 4e-46
Identities = 1120/1762 (64%), Gaps = 61/1762 (3%)
Strand=Plus/Minus
Query 148047 TTAAACGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT- 148103
|| |||||||| ||| ||||| || || ||||||||||| ||||| | || | ||
Sbjct 120188 TTCAACGACTGAGACTGATCAATAAAGGCACCACGGTCAGCAGCCATCTGAACAACAGTA 120129
Query 148104 CGCTTTATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCG 148163
|||| |||||||| | ||||||||||| |||||| | ||||||||| |
Sbjct 120128 CGCTGAGAA---ATCTCCCAAACAGTCTTGTACAGAGACTTGATGTCCGCGGGAATGCTG 120072
Query 148164 TCGATGCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTAT 148223
|||| ||| || || ||| || || || || | || ||| | |||| |
Sbjct 120071 GGGATGTTCTGAACAGAACCGTTGTCCGAAATGATGCGGTTCTTCATGTTATCCGACCAC 120012
Query 148224 AGGTTGAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCG 148283
|| || || | ||||| | || | | || || ||||| ||||| || ||
Sbjct 120011 AGACCAAGGTCAACAAGGTCGCGAAGCAACCAAGGGTTGACAACCTGGAACTCACCAGCC 119952
Query 148284 AGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAA 148343
| ||| || ||| | || | ||| || | || || || |||||||||| |||| |
Sbjct 119951 AACACACGGCGCTGGTAAATGTTTGAAGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGA 119892
Query 148344 ATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGA 148403
||||| | || | || ||||||||| ||| || |||||||||||||| | ||||
Sbjct 119891 ATCTGGGAAGTTGAGGCAGTGGGCATGGGCGCCACAAGCAGCGAGTTGCGAACACCGTTC 119832
Query 148404 TTTTTTATTTTGCGC-TTCAGAGCCGCCCAGTCCCAGAGCGGCGAC--GGTGTCACGTTC 148460
| || | | ||| | ||||||| ||| ||||| | || || || || || | |
Sbjct 119831 TGCTTGA-TCTGCTCTTTCAGAGAGTTCCAATCCCACA--GGTCACTGGGGGTGACATCC 119775
Query 148461 CACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGT 148520
||||||||| |||| || || || || | || ||||||||| | ||| ||
Sbjct 119774 CACATGTCGAACTGAAGGATACCCTGGGAGACAGGAGAGCCCTCGTAGGTCGAGTAAGGA 119715
Query 148521 CCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCA 148580
|| | | || || | ||||| || || || || ||| |||||| |||||
Sbjct 119714 CCTTCAACAGCGGCGATGTCGCATGAAGCTTCCAGGGCAGCGTGGTAAATGGTCTCAAAG 119655
Query 148581 ATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAAC 148640
|| ||| |||||||| | ||| | || | ||||| || || || ||
Sbjct 119654 ATCTGCTTGTTGAGCTGACGAGCCTCGGCAGACTCAAAAGGCATGCGAAGGGCCAGGAAG 119595
Query 148641 GCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGC 148700
|| ||||| || ||||| || || || |||||||| ||||| |||||| | ||
Sbjct 119594 GCATCGGCCAGACCCTGGACACCAACACCAATGGGACGGTGACGCATGTTGCTGTTCCGG 119535
Query 148701 GCGCTC-TCGAGCGGATAGTGGTTGCGGTCGATGAT-CTTGTCAAGATTGCGCACCACCA 148758
|| ||| | | || |||||||| || ||||| | ||||| ||||| || || |
Sbjct 119534 GC-CTCGACAACAGGGTAGTGGTTCACATCAATGATACGGTTCAAG-TTGCGGACAACAA 119477
Query 148759 CCTTTGTAATTCTGCGCAGCAATTCAAAATCGT---ACTTG-TCATCTACGATGCATCGG 148814
|||| || | | ||||| | || |||| | ||| | | || ||| ||
Sbjct 119476 CCTTGGTGACATCGTGCAGCTTCTGGAAGTCGTAGCAGTTGTTGGTGTAGTCAACATAGG 119417
Query 148815 TTCACG----GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTC 148870
|| | |||| || || | |||||||| || |||||| || |||| ||||||
Sbjct 119416 --CAGGGAGAGCGACCGACGCCAAGTTGCACACAGCGACCTCATCAGGAGCGCAGTACTC 119359
Query 148871 TACGATCTCGGCGCACAGATTG---CTGCATTTGATCACGCCCACGTTCTTTTGATTGCT 148927
| ||||| | ||| || ||| |||| || | |||| |||||| || || ||
Sbjct 119358 GATAATCTCAGTGCAAAGGTTGGAACTGCGAATGGT---TCCCAGGTTCTTCTGGTTACT 119302
Query 148928 CTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTC 148987
||||| |||||| |||||||||| |||| | || ||||| || ||| | |||
Sbjct 119301 CTTGCGGTTGCAGTGATCCTTGTACAACATGAAAGGGTTACCAGTCTCAGTCTGAGCTTC 119242
Query 148988 CACTATGAACCGA-TGCAGGTCCTGCGCGCGCACTTGCTGCT-----CGTAGCGACCCTC 149041
|| || | | | ||| | ||| || |||| || | | || || ||
Sbjct 119241 CAGAAT-AGCATACCACAGCTTCTGAGC-----CTTGATGGTAAGACGGCCACGTCCTTC 119188
Query 149042 CTGCTCGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCG 149099
| ||||||| | | ||| | ||| ||| || |||| ||||||||||| | | ||
Sbjct 119187 CCGCTCGTACTTGATGTAGAGAGC--CTCAAATTCCTCACCGTAGCAATCAGCTAAGCCA 119130
Query 149100 GGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAAC 149159
||||||| || ||||||||||| | ||| |||||| | | || |||||||| |||
Sbjct 119129 GGGCACTCGTTGGGGCACATGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAAC 119070
Query 149160 AGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGC-AGTCT--TCGGCGCCC 149216
| |||||| | ||| || || | | ||||| || || | ||| || ||
Sbjct 119069 AAATCGGGGATCCACAGGGCAAGGAACAAATCGCGGGC---GCGAATCTCCTCCTTACCG 119013
Query 149217 ATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACC 149276
||| || |||| || | || | || |||||||||||||| | ||| |
Sbjct 119012 TGGTTCTTCCGGAGGTCAAGGAACTCAAACACATCAGCGTGCCACGGCTCCAGGTAAATG 118953
Query 149277 GCGAGCGCGCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAAC 149333
|| | || || |||||| || ||||| ||||||| || | ||||||| ||
Sbjct 118952 GCAAAAGCACCAGGACGCTTGTTACCACCCTGATCGACGTAACGAGCAGTGTTGTTGAAG 118893
Query 149334 ACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCG 149393
|| || | |||||| ||||||| | | || ||||| || | |||| ||
Sbjct 118892 ACACGCAGCATAGGAACAATGCCGTTCGAGGTACCGTTGGTGCCGGCAATGTAGGAACCA 118833
Query 149394 CGCGCTCGCACTTTGTGCACGTTGACGCCGATGCC-GCCGCCGTACTTTGAGATGGCCGC 149452
|| || | ||| |||||| ||||| || ||||| | ||| ||||| ||
Sbjct 118832 GTAGCACGGATACGGTGGGCGTTGAGACCGATACCACCCGCCAT-CTTGGAGATCATAGC 118774
Query 149453 GCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAA 149512
||| ||| || ||||| || ||||| ||||| ||||||| | || ||
Sbjct 118773 ACAGGTCTTGAGGGTATCATAGATACCTTCGATACTGTCTTCCTTCATGTCTACCAAGAA 118714
Query 149513 GCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT 149572
||| || | | || || | | || ||||| ||| | ||| || |||||| ||
Sbjct 118713 GCAGGAAGAAAGCTGAGGCTGAGGGGTACCGGCGTTGAAGAGGGTAGGAGAGGCGTGAGT 118654
Query 149573 -AAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCAT 149631
|| | || || | ||| | | ||| | || || || || || | | ||| ||
Sbjct 118653 GAAGAACTTGCTCG-ACATGAGGTTGTAAGTTTCCAGAACACGCTCAACATTATCACCCC 118595
Query 149632 GGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAA 149691
|| || | || || ||||| | ||| ||||| || ||||| | | ||| |||
Sbjct 118594 AAATACCGACAGCAACACGCATAATCATGTGCTGAGGACGCTCGACAATCTTGCCATCAA 118535
Query 149692 TTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGC 149751
||||| | ||| | || | |||||| | |||||||||| ||||| |||||||
Sbjct 118534 GCTTGAGAAGGTAAGATCTCTCCAAGGTCTTGAATCCAAAGTACTGGTAGTTGAAGTCGC 118475
Query 149752 GGCCGTGGTCAATGGCGGCGTC 149773
|| | | ||||||| | |||
Sbjct 118474 GGTCATATACAATGGCCGAGTC 118453
>seq191
Length=257482
Score = 120 bits (132), Expect = 3e-22
Identities = 133/175 (76%), Gaps = 2/175 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||||||| | ||| | | | ||||| ||||||||||
Sbjct 143664 GGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCA-TCCTCAAGCTGCTTGC 143722
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| |||| || ||||||||||| || || || || |||||||| |||||| ||
Sbjct 143723 CAGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACT 143782
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||| | |||| || |||| || ||| || |||| ||||| ||| ||||||||
Sbjct 143783 TGACATTGTCAATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 143837
Score = 113 bits (124), Expect = 4e-20
Identities = 151/208 (73%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512
|| || | ||||||||| ||||| || ||||| || | | | | ||| ||||| |
Sbjct 143200 AAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC--CGAGAGAGTACGGCCATCCTCAA 143257
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
||||||| || ||| |||| || ||||||||||| || ||||| || |||||||| ||
Sbjct 143258 GCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGA 143317
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||| | | || | || || | | ||| || || | ||| | ||| ||||
Sbjct 143318 TCTTCGACTTAACATTGTCGATAGTATCCGACGACTCGACCTCAAGGGTAATGGTCTTGC 143377
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||||| || || ||||||||||||||
Sbjct 143378 CGGTCAGGGTCTTGACGAAAATCTGCAT 143405
Score = 107 bits (118), Expect = 2e-18
Identities = 145/200 (73%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520
||| ||||| ||||| || ||||| || || || ||| |||||| ||||||||
Sbjct 142980 GGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGT--ACGGCCGTCCTCCAGCTGCTTA 143037
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
|| || | || || ||||||||||| || || ||||| |||||||| |||||| |
Sbjct 143038 CCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTC 143097
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|||| | || | || || | | ||| || || | |||| ||| ||||||||||||
Sbjct 143098 TTGACGTTGTCGATGGTATCAGAAGACTCGACCTCAAGAGTGATGGTCTTGCCGGTCAGA 143157
Query 133641 GTTTTTACGAAAATCTGCAT 133660
|| || ||||| ||||||||
Sbjct 143158 GTCTTCACGAAGATCTGCAT 143177
>seq419
Length=149002
Score = 104 bits (114), Expect = 2e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| ||||||||||| ||| | || || ||||||||||| || || ||||| ||||||
Sbjct 86436 TCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 86495
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | |||||| | | ||| || || | |||||
Sbjct 86496 TCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATC 86555
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || || || || ||||||||||||||
Sbjct 86556 GTCTTACCCGTAAGGGTCTTAACGAAAATCTGCAT 86590
>seq236
Length=225512
Score = 104 bits (114), Expect = 2e-17
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699
||||| |||||||||||||| || ||||| || || || || ||||||||| || |||
Sbjct 196780 AGGCAGGCAAAGTCCGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTC 196839
Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTG---ATGTAGAATATGGCGGCAAAGCTGCCCGAA 120756
| |||||||| || || || |||| | | || |||| |||||| || ||
Sbjct 196840 AAACCGGGCATCATACC--ACG-CTTGCGCAGCCAAAAGATGGAGGCAAAAGCACCAGAG 196896
Query 120757 AAGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTG 120816
||||| | ||||| || ||||||||| || | |||| || || |||| | ||||
Sbjct 196897 AAGAAGATACCCTCAACAGCGGCAAAGGCAACAAGACGCTGAGCAAAAGTCGACTCCTTG 196956
Query 120817 -CTGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866
| || |||||||||| |||||| |||||||| ||| | ||| || ||
Sbjct 196957 TCAGT-AATCCACTTCAGGGCCCAGTCGGCCTTGCGGCGAATGCAGGGAAT 197006
>seq438
Length=409217
Score = 102 bits (112), Expect = 8e-17
Identities = 138/190 (73%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| || || ||| | | | ||||| |||||||||||
Sbjct 73279 GTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCA-TCCTCAAGCTGCTTGCC 73337
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || ||||||||||| || || || || |||||||| |||||| |||
Sbjct 73338 AGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTT 73397
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||||| | | ||| || || | ||||| ||| || || ||||| ||
Sbjct 73398 GACGTTGTCGATGGTGTCCGAAGACTCGACCTCCAGGGTGATGGTCTTACCCGTCAGGGT 73457
Query 133643 TTTTACGAAA 133652
|| ||||||
Sbjct 73458 CTTGACGAAA 73467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483418092843520
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