Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq429 86.0 1e-11 >seq429 Length=129737 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 279870 TAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAAT 279929 || ||||||| |||| || ||||| ||| |||| | ||||||||| || || Sbjct 62094 TATTGGATGGACTGAAGCCGGGTCAGCGCAAGGTTATGTATGCTTGTTTCAAGAGTAACG 62153 Query 279930 TGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATC 279989 || | ||||| || |||| | |||| || ||||||||||| | || | || | Sbjct 62154 TGATCAAGGACATGAAGGTTGTTGAGTTGGCTGGTTATGTTTCTGGTCAGACGTCGTACC 62213 Query 279990 ATCACGGTGAAGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCCCAAGATTTTATGGCTT 280049 | ||||||||||| || || || | ||| | |||||||| || || ||| | | || Sbjct 62214 AACACGGTGAAGCTTCCCTGCAGCAGACGATTATTGGTCTTGCTCAGGACTTTGTCGGTT 62273 Query 280050 CAAACAACTTAAATCTGCTTTCACCAAATGGTCAATTTGGTTCTCGTATT 280099 | |||||| | ||| || ||| | |||| | || ||||||||| || Sbjct 62274 CTAACAACGTCAATTGCCTGGAACCCAGTGGTAACTTCGGTTCTCGTCTT 62323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186805987694528