Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq191 120 3e-22 seq419 113 4e-20 seq438 100 3e-16 >seq191 Length=257482 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | || ||| || |||| |||||||||||||| ||||| Sbjct 142986 CTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCAAA 143045 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| |||| || |||||||||| |||||| ||| | || Sbjct 143046 GATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGT 143104 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || || || ||||| | ||||| || || || |||| ||| |||| Sbjct 143105 TGTCGATGGTATCAGAAGACTCGACCTCAAGAGTGATGGTCTTGCCGGTCAGAGTCTTCA 143164 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 143165 CGAAGATCTGCAT 143177 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| | ||| || | || || ||||||||||| ||||| Sbjct 143442 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCAAGCTGCTTACCAGCAAA 143501 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||| ||||||| |||| || |||||||||| ||||| ||| | || Sbjct 143502 GATAAGACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGA-CGT 143560 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || || ||||| | ||||| || || || |||| ||| || | Sbjct 143561 TGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTGCCAGTCAGAGTCTTGA 143620 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 143621 CAAAGATCTGCAT 143633 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||| | ||| || | || || |||||||| || || || Sbjct 143670 CTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 143729 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 |||| ||||||||||||| |||| | |||||||||| |||||| Sbjct 143730 AATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTT 143777 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | || || | || || ||||||||||| || || Sbjct 143214 CTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAA 143273 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| || | | |||||||||| |||||| ||| | | | Sbjct 143274 AATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACATT 143333 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || ||| || ||||| | || || || || || |||| || || || Sbjct 143334 GTCGATAGTATCCGACGACTCGACCTCAAGGGTAATGGTCTTGCCGGTCAGGGTCTTGAC 143393 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 143394 GAAAATCTGCAT 143405 >seq419 Length=149002 Score = 113 bits (124), Expect = 4e-20 Identities = 141/191 (74%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| || | | ||| || | || ||||||||||| || || || | Sbjct 86401 CCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 86460 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||||||||||| |||| || |||||||||| |||||| ||| | |||| Sbjct 86461 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 86519 Query 35667 -CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| || || ||||| | |||||||| |||||||| | || || || Sbjct 86520 TCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTAACG 86579 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 86580 AAAATCTGCAT 86590 >seq438 Length=409217 Score = 100 bits (110), Expect = 3e-16 Identities = 134/184 (73%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | || ||| || | || || |||||||| || || || Sbjct 73284 CTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 73343 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| | |||||||||| |||||| ||| | || Sbjct 73344 GATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 73402 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || || ||||||| ||||| || |||||||||| || || | Sbjct 73403 TGTCGATGGTGTCCGAAGACTCGACCTCCAGGGTGATGGTCTTACCCGTCAGGGTCTTGA 73462 Query 35724 CAAA 35727 | || Sbjct 73463 CGAA 73466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791075555840