Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq405 228 1e-54
seq236 87.8 2e-12
>seq405
Length=464752
Score = 228 bits (252), Expect = 1e-54
Identities = 940/1467 (64%), Gaps = 43/1467 (3%)
Strand=Plus/Minus
Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765
|||| ||||||| ||||| || || ||||| || || ||||||| || || | || |
Sbjct 119938 GGTAAATGTTTGAAGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGAATCTGGGAAGTTG 119879
Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825
|||| || ||||| || |||| | || ||| |||| ||| |||| |||||| | |
Sbjct 119878 AGGCAGTGGGCATGGGCGCCACAAGCAGCGAGTTGCGAACACCGTTCTGCTTGATCTGCT 119819
Query 110826 CCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883
| || ||| | ||| || | | | | || || | || | |||||||||| |||||
Sbjct 119818 CTTTCAGAGAGTTCCAATCCCACAGGTCA-CTGGGGGTGACAT-CCCACATGTCGAACTG 119761
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943
||| | || ||||| | ||||| ||||| |||| || | ||||| | | ||
Sbjct 119760 AAGGATACCCTGGGAGACAGGAGAGCCCTCGTAGGTCGAGTAAGGACCTTCAACAGCGGC 119701
Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003
| || || || ||||||| ||||| || ||||| |||||||| | || |
Sbjct 119700 GATGTCGCATGAAGCTTCCAGGGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAG 119641
Query 111004 CTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCG 111058
|| || || | || ||||| |||| || | || || |||| ||
Sbjct 119640 CTGACGAGCCTCGGCAGACTCAAAAGGCATGCGAAGGGCCAGGAAGG-----CATCGGCC 119586
Query 111059 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA 111118
||||| || ||||| | |||||| || | ||| ||||| || || || || ||
Sbjct 119585 AGACCCTGGACACCAACACCAATGGGACGGTGACGCATGTTGCTGTTCCGGGCCTCGACA 119526
Query 111119 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 111178
|| || || || ||||||| ||||| | || | ||||| ||| ||||
Sbjct 119525 ACAGGGTAGTGGTTCACATCAATGATACGGTTCAAGTTGCGGACAACAACCTTGGTGACA 119466
Query 111179 TCATGAAGTTTTTCATAATCAAA--AGT-GCGAGTCTCTTCATTGACATACTTTGGAAGG 111235
|| || || || | | || | ||| | || | ||| ||||| || ||
Sbjct 119465 TCGTGCAGCTTCTGGAAGTCGTAGCAGTTGTTGGTGTAGTCA---ACATAGGCAGGGAGA 119409
Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295
|||| || ||||| ||||| ||||| |||||| | | |||||| | ||| ||
Sbjct 119408 GCGACCGACGCCAAGTTGCACACAGCGACCTCATCAGGAGCGCAGTACTCGATAATCTCA 119349
Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355
|| || | ||||||||| ||| || |||| ||||| ||||||||||| ||||||
Sbjct 119348 GTGCAAAGGTTGGAACTGCGAATGGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAG 119289
Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415
||||||||| | |||| | || | || ||||| ||||| | || |||||||| | |
Sbjct 119288 TGATCCTTGTACAACATGAAAGGGTTACCAGTCTCAGTCTGAGCTTCCAGAATAGCATAC 119229
Query 111416 CA-AACATCGGCGGCTGGTACAATGG--CGTTGGCC-CGTCCCTCCGCCTCGTACTTTGT 111471
|| | | || | | || | |||| | |||| ||||| ||| ||||||||| |
Sbjct 119228 CACAGCTTCTGAGCCTTG----ATGGTAAGACGGCCACGTCCTTCCCGCTCGTACTTGAT 119173
Query 111472 GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACA 111531
|||||| || ||||| |||||||| || | | || || || || || ||
Sbjct 119172 GTAGAGAGCCTCAAATTCCTCACCGTAGCAATCAGCTAAGCCAGGGCACTCGTTGGGGCA 119113
Query 111532 GAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 111591
| || | ||||| || | |||||| ||||||||||| | || || ||||||||
Sbjct 119112 CATGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAACAAATCGGGGATCCACAG 119053
Query 111592 GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 111651
|| || | ||| | ||| ||| || | ||| ||||| || | |||||
Sbjct 119052 GGCAAGGAACAAATCGCGGGCGCGAATCTCCTCCTTACCGTGGTTCTTCCGGAGGTCAAG 118993
Query 111652 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACG 111711
|||||| | | ||| |||||||| ||||| || || | || | || || ||||
Sbjct 118992 GAACTCAAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACC---AGGACG 118936
Query 111712 C------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 111765
| ||| | |||| || || || || ||| ||| || || || ||||| ||||
Sbjct 118935 CTTGTTACCACCCTGATCGACGTAACGAGCAGTGTTGTTGAAGACACGCAGCATAGGAAC 118876
Query 111766 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 111825
||| || | || ||| || || || ||| || | | || | | | ||
Sbjct 118875 AATGCCGTTCGAGGTACCGTTGGTGCCGGCAATGTAGGAACCAGTAGCACGGATACGGTG 118816
Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885
| || | || ||||| || ||| ||| ||||| ||||| | | || || |
Sbjct 118815 GGCGTTGAGACCGATACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATC 118756
Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945
||||||||| | ||| ||| ||||| || | | | |||||| || | ||| ||
Sbjct 118755 ATAGATACCTTCGATACTGTCTTCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGAGG 118696
Query 111946 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGAC 112003
|| ||||| || ||||||||||| || | |||||| ||| | | |||| |||
Sbjct 118695 CTGAGGGGTACCGGCGTTGAAGAGGGTAGGAGAGGCGTGAGTGA--AGAACTTGCTCGAC 118638
Query 112004 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACC 112063
|| || ||| || |||| ||| |||| | || || || |||| || ||
Sbjct 118637 ATGAGGTTGTAAGTTTCCAGAACACGCTCAACATTATCACCCCAAATACCGACAGCAACA 118578
Query 112064 CGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGAT-AGCT 112122
||||| | ||||| ||| || || | | ||||||| ||| |||| | || |
Sbjct 118577 CGCATAATCATGTGCTGAGGACGCTCGACAATCTTGCCATCAAGCTTGAGAAGGTAAGAT 118518
Query 112123 CTTCTCAAGGGTTTTGAGACCAAAGTA 112149
| |||| | ||| |||| ||||||||
Sbjct 118517 C-TCTCCAAGGTCTTGAATCCAAAGTA 118492
>seq236
Length=225512
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717
|||||| ||| ||| ||||||||||| || || ||||| || || ||||| | |||
Sbjct 196785 GGCAAAGTCCGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAAACC 196844
Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777
||||| | ||| ||||| || |||| | || | | || | || |||||||||||
Sbjct 196845 GGGCATCATACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAAGCACCAGAGAAGAAGAT 196904
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAA 122836
|||||| ||| ||||| |||| ||| || | || || | ||| | ||| || ||
Sbjct 196905 ACCCTCAACAGCGGCAAAGGCAACAAGACGCTGAGCAAAAG-TCGACTCCTTGTCAGTAA 196963
Query 122837 ACCATTTCATTGCCCATTTCGCCTT 122861
||| |||| ||||| | |||||
Sbjct 196964 TCCACTTCAGGGCCCAGTCGGCCTT 196988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628028483020800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |