Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq405 235 6e-57
seq236 129 7e-25
>seq405
Length=464752
Score = 235 bits (260), Expect = 6e-57
Identities = 897/1394 (64%), Gaps = 33/1394 (2%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| | ||||| || || |||||||| || || | |||| |||
Sbjct 118558 CCTCAGCACATGATTATGCGTGTTGCTGTCGGTATTTGGGGTGATAATGTTGAGCGTGTT 118617
Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339
|||| || ||| || ||||| |||| | | ||| |||||| | || |||||||
Sbjct 118618 CTGGAAACTTACAACCTCATGTCGAGCAAGTTCT--TCACTCACGCCTCTCCTACCCTCT 118675
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|||| || ||||| || || || | || |||||| | | | || ||||| |
Sbjct 118676 TCAACGCCGGTACCCCTCAGCCTCAGCTTTCTTCCTGCTTCTTGGTAGACATGAAGGAAG 118735
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
|| ||| | |||||||||| || || | | ||||| ||||| ||| ||| |
Sbjct 118736 ACAGTATCGAAGGTATCTATGATACCCTCAAGACCTGTGCTATGATCTCCAAGATGGCGG 118795
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519
| ||||| || | || ||| | | | || | | || ||| || || |
Sbjct 118796 GTGGTATCGGTCTCAACGCCCACCGTATCCGTGCTACTGGTTCCTACATTGCCGGCACCA 118855
Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
| ||| || | || ||| |||| ||||| || || || ||| ||| || || || |
Sbjct 118856 ACGGTACCTCGAACGGCATTGTTCCTATGCTGCGTGTCTTCAACAACACTGCTCGTTACG 118915
Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
| |||| | ||| ||||| || || | || | || || ||||| ||||
Sbjct 118916 TCGATCAGGGTGGTAACAAGCGTCCT---GGTGCTTTTGCCATTTACCTGGAGCCGTGGC 118972
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
|||| ||| | | ||||||||||| | || ||||| ||| | |||||| ||
Sbjct 118973 ACGCTGATGTGTTTGAGTTCCTTGACCTCCGGAAGAACCACGGTAAGGAGGAGATTCGCG 119032
Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
||||||| | ||| || || ||||| || ||| | ||||||||| | |||||| |||
Sbjct 119033 CCCGCGATTTGTTCCTTGCCCTGTGGATCCCCGATTTGTTCATGAAGCGTGTTGAGAAGA 119092
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813
||| | ||| | ||| | || || || || ||||| | | ||| | ||||
Sbjct 119093 ACGGCGAATGGACCCTCATGTGCCCCAACGAGTGCCCTGGCTTAGCTGATTGCTACGGTG 119152
Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGG--CGACTGCGACGGT 104871
|||| ||||| || || |||| ||||||||| ||||| || | || || || |
Sbjct 119153 AGGAATTTGAGGCTCTCTACATCAAGTACGAGCGGGAAGGACGTGGCCGTCTT--ACCAT 119210
Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930
||| | || | ||||| | |||||||| | |||| || |||||||||| || |
Sbjct 119211 CAAGGCT-CAGAAGCTGTGGTATGCTATTCTGGAAGCTCAGACTGAGACTGGTAACCCTT 119269
Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
|||| | ||||| || ||| |||| |||||||| || ||||| |||| ||
Sbjct 119270 TCATGTTGTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAACCTGGGAACCATTC 119329
Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050
|||||||| || || || || || | || | | |||||| |||||||
Sbjct 119330 GCAGTTCCAACCTTTGCACTGAGATTATCGAGTACTGCGCTCCTGATGAGGTCGCTGTGT 119389
Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTGAT 105109
| ||| | || || |||||||||| ||||| || | || |||| | | ||
Sbjct 119390 GCAACTTGGCGTCGGTCGCTCTCCCTGCCTATGTTGACTACACCAACAACTGC-TACGAC 119448
Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169
| | || || ||||| || || || ||| | ||| | ||| | | ||||||
Sbjct 119449 TTCCAGAAGCTGCACGATGTCACCAAGGTTGTTGTCCGCAACTTGAACCGTATCATTGAT 119508
Query 105170 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 105229
|| ||||| |||| || || || || ||| | |||||||| ||||||
Sbjct 119509 GTGAACCACTACCCTGTTGTCGAGGCCCGGAACAGCAACATGCGTCACCGTCCCATTGGT 119568
Query 105230 CTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGAC 105289
| ||||| |||||||| || |||| ||| | |||| | ||||| || | |
Sbjct 119569 GTTGGTGTCCAGGGTCTGGCCGATGCCTTCCTGGCCCTTCGCATGCCTTTTGAGTCTGCC 119628
Query 105290 GAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCG 105349
|| || | |||| || || ||||||||||| || ||||| || || || ||
Sbjct 119629 GAGGCTCGTCAGCTCAACAAGCAGATCTTTGAGACCATTTACCACGCTGCCCTGGAAGC- 119687
Query 105350 AGTTCA---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 105406
|||| || | || | ||||| ||||| || |||| ||||| ||||| |
Sbjct 119688 --TTCATGCGACATCGCCGCTGTTGAAGGTCCTTACTCGACCTACGAGGGCTCTCCTGTC 119745
Query 105407 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCAC---TACGAC 105463
|| || || | ||||| || || ||||||| | || | || || | || | ||
Sbjct 119746 TCCCAGGGTATCCTTCAGTTCGACATGTGGG-ATGTCACCCCCAG--TGACCTGTGGGAT 119802
Query 105464 TGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523
||| | |||| || || | |||||| |||| ||| |||| ||| || || ||||
Sbjct 119803 TGGAACTCTCTGAAAGAGCAGATCAAGCAGAACGGTGTTCGCAACTCGCTGCTTGTGGCG 119862
Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583
|| ||||| || ||||| || | || || ||||||| || || ||||| || || |||
Sbjct 119863 CCCATGCCCACTGCCTCAACTTCCCAGATTCTGGGTAACAACGAGTGCTTCGAGCCTTAC 119922
Query 105584 ACGACGAACATCTA 105597
|| | ||||| ||
Sbjct 119923 ACTTCAAACATTTA 119936
>seq236
Length=225512
Score = 129 bits (142), Expect = 7e-25
Identities = 212/303 (70%), Gaps = 6/303 (2%)
Strand=Plus/Minus
Query 94656 GGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCT 94715
|||||| ||| | || || |||| || |||||||| |||| || | | ||
Sbjct 197085 GGAGACCTACTCTTTGCTGATCGACACCTACATTAAGGAGCCTGCTCAGCGCACATACCT 197026
Query 94716 CTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTG 94775
||| | ||||| | || |||| || |||| || || || ||||| |||||||
Sbjct 197025 CTTCAACGCCATTGACACTATTCCCTGCATTCGCCGCAAGGCCGACTGGGCCCTGAAGTG 196966
Query 94776 GTTTGAT-ACAA--AGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832
| || | |||| ||||| || ||||| |||| || | || ||||| ||||||
Sbjct 196965 GATTACTGACAAGGAGTCGACTT---TTGCTCAGCGTCTTGTTGCCTTTGCCGCTGTTGA 196909
Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892
||||||||||||||||||| | || | | || | |||||| ||||| ||| | ||
Sbjct 196908 GGGTATCTTCTTCTCTGGTGCTTTTGCCTCCATCTTTTGGCTGCGCAAGCGTGGTATGAT 196849
Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 94952
||| ||| | |||||||||||||||||||||||||| ||||| || ||| || ||
Sbjct 196848 GCCCGGTTTGACTTTCTCCAACGAGCTTATCTCTCGTGATGAGGGTCTTCACACGGACTT 196789
Query 94953 TGC 94955
|||
Sbjct 196788 TGC 196786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583257533739520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |