Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq405 259 5e-64
seq191 194 2e-44
seq438 150 2e-31
seq419 127 2e-24
>seq405
Length=464752
Score = 259 bits (286), Expect = 5e-64
Identities = 906/1400 (65%), Gaps = 36/1400 (3%)
Strand=Plus/Minus
Query 80374 CGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGA 80433
|| ||| | || | ||||| |||||||||||| || ||||||||| || || |||||
Sbjct 119945 CGGCGCTGGTAAATGTTTGAAGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGAATCTGG 119886
Query 80434 GCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTG 80493
| || || || ||||| || | || | ||| || || || | |||| || ||||
Sbjct 119885 GAAGTTGAGGCAGTGGGCATGGGCGCCACAAGCAGCGAGTTGCGAACACCGTTCTGCTTG 119826
Query 80494 ATATCCTCGCGCAAATCTGACCAAAAATCAACCCCAA--CGCTG----TGAC--CCCACA 80545
|| | ||| || | |||| || || || | ||| |||| ||||||
Sbjct 119825 ATCTGCTCTTTCAGAGAGTTCCAA---TC--CCACAGGTCACTGGGGGTGACATCCCACA 119771
Query 80546 TGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCT 80605
||||| ||| | ||| |||| || | ||||| ||| || | ||| ||| || || |
Sbjct 119770 TGTCGAACTGAAGGATACCCTGGGAGACAGGAGAGCCCTCGTAGGTCGAGTAAGGACCTT 119711
Query 80606 CCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGC 80665
| ||| | || || || | ||||| ||||| |||||| ||||||||
Sbjct 119710 CAACAGCGGCGATGTCGCATGAAGCTTCCAGGGCAGCGTGGTAAATGGTCTCAAAGATCT 119651
Query 80666 CCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGT 80725
|||||| | || |||| | || || | || || | || ||| | |
Sbjct 119650 GCTTGTTGAGCTGACGAGCCTCGGCAGACTCAAAAGGCATGCGAAGGGCCAGGAAGGCAT 119591
Query 80726 CAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTC--GGC 80783
| ||||| ||||| || || | | || || ||||| ||| |||| | | | || |||
Sbjct 119590 CGGCCAGACCCTGGACACCAACACCAATGGGACGGTGACGCATGTT-GCT-GTTCCGGGC 119533
Query 80784 CTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCG 80843
||| || ||||| ||| ||| |||| ||||||| |||||| |||||||
Sbjct 119532 CTCGACAACAGGGTAGTGGTTCACATCAATGATACGGTTCAAGTTGCGGACAACAACCTT 119473
Query 80844 TGTAACATCATGAAGTTTCTGAAAGTCGAAT---TGGTTCCCCT--TCA-CAAATGCCGG 80897
|| ||||| || || ||||| |||||| | | ||| | ||| || | || ||
Sbjct 119472 GGTGACATCGTGCAGCTTCTGGAAGTCGTAGCAGTTGTTGGTGTAGTCAACATAGGCAGG 119413
Query 80898 AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGAT 80957
|| | ||||||| |||||||| || ||||| |||| | | |||||| ||
Sbjct 119412 GAGAGCGACCGACGCCAAGTTGCACACAGCGACCTCATCAGGAGCGCAGTACTCGATAAT 119353
Query 80958 TTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTT 81017
|| ||||| | || ||| ||| || |||||||| |||||||| |||| |||
Sbjct 119352 CTCAGTGCAAAGGTTGGAACTGCGAATGGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTT 119293
Query 81018 GCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGC 81077
||| |||||||| ||||| | ||| |||| ||||| ||| | | || || ||
Sbjct 119292 GCAGTGATCCTTGTACAACATGAAAGGGTTACCAGTCTCAGTCTGAGCTTCCAGAATAGC 119233
Query 81078 GTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGC 81137
| ||| | || | ||||||| ||| ||||| | | ||||||
Sbjct 119232 ATACCACAGCTTCTGAGCCTTGATGGTAAGACGGCCACGTCCTTCCCGCTCGTACTTGAT 119173
Query 81138 GTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCA 81197
||| | || || | |||||| |||| | | | ||||||||||| |||||
Sbjct 119172 GTAGAGAGCCTCAAATTCCTCACCGTAGCAATCAGCTAAGCCAGGGCACTCGTTGGGGCA 119113
Query 81198 CATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAG 81257
||| ||| ||| ||| || ||||| ||| ||||||||| || |||||||| ||
Sbjct 119112 CATGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAACAAATCGGGGATCCACAG 119053
Query 81258 GGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAG 81317
||| ||||| |||||| ||| |||||| | ||| ||||| || | || ||
Sbjct 119052 GGCAAGGAACAAATCGCGGGCGCGAATCTCCTCCTTACCGTGGTTCTTCCGGAGGTCAAG 118993
Query 81318 AAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC-----CCCTT 81371
|| || | | || || ||||| |||||||| || | ||| | | || | |||
Sbjct 118992 GAACTCAAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGACGCTT 118933
Query 81372 GCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGAT 81431
| | |||||||| | ||||||||| ||||| ||| || ||||||| |||||| |
Sbjct 118932 GTTA---CCACCCTGATCGACGTAACGAGCAGTGTTGTTGAAGACACGCAGCATAGGAAC 118876
Query 81432 GATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG--CACCTTG 81489
|| || | || |||||| || || | || || || | || || || ||
Sbjct 118875 AATGCCGTTCGAGGTACCGTTGGTGCCGGCAATGTAGGAACCAGTAGCACGGATACGGTG 118816
Query 81490 CTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTC 81549
||| |||||||| ||||| | | ||| || ||| |||||| || | |||
Sbjct 118815 GGCGTTG--AGACCGATACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTA 118758
Query 81550 TCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGA 81609
||||| || || ||||| || |||| |||||||| | |||||| ||| || | ||||
Sbjct 118757 TCATAGATACCTTCGATACTGTCTTCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGA 118698
Query 81610 GGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGAC 81669
|| | ||||| ||||| || || || | |||||| |||| | | | |||
Sbjct 118697 GGCTGAGGGGTACCGGCGTTGAAGAGGGTAGGAGAGGCGTGAGTGAAGAACTTGCTCGAC 118638
Query 81670 ATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACA 81729
|| |||| || |||||| || || || || ||||| |||||||| ||| |||
Sbjct 118637 ATGAGGTTGTAAGTTTCCAGAACACGCTCAACATTATCACCCCAAATACCGACAGCAACA 118578
Query 81730 CGCATAAACATGTACTGGGG 81749
||||||| ||||| ||| ||
Sbjct 118577 CGCATAATCATGTGCTGAGG 118558
>seq191
Length=257482
Score = 194 bits (214), Expect = 2e-44
Identities = 179/227 (79%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || |||||||| || ||||| ||||||||||| |
Sbjct 143633 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCCTCT 143574
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| | || ||||||||||||||||| ||||| || |||||
Sbjct 143573 GACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAA 143514
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||||||||||| || ||||||| |||||||| | ||||| ||
Sbjct 143513 CAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGTACCCTCTCCGACTACAAC 143454
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || ||||| || || ||| | || ||||| |||||
Sbjct 143453 ATTCAGAAGGAGTCTACTCTCCACCTTGTCCTCCGCCTTCGTGGTGG 143407
Score = 181 bits (200), Expect = 1e-40
Identities = 178/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || ||||||||||| || ||||||||||| ||||| |
Sbjct 143177 ATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACCATCACTCTTGAGGTCGAGTCTTCT 143118
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||| || || |||||||||||||| ||||| || ||||||
Sbjct 143117 GATACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 143058
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||||||||||| || ||||| | |||||||| | ||||| ||
Sbjct 143057 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTGTCTGACTACAAC 142998
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| || || || || || || | ||||| || ||||| ||
Sbjct 142997 ATCCAGAAGGAGTCTACCCTCCACCTGGTTCTCCGTCTCCGTGGTGGCCA 142948
Score = 179 bits (198), Expect = 4e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || ||||||||||| ||||| |||||||| |||||
Sbjct 143405 ATGCAGATTTTCGTCAAGACCCTGACCGGCAAGACCATTACCCTTGAGGTCGAGTCGTCG 143346
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| | ||| | || || |||||||||||||| || || || ||||||
Sbjct 143345 GATACTATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 143286
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || ||||| ||||||||||| || ||||||| ||||| || | ||||| ||
Sbjct 143285 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACTCTCTCGGACTACAAC 143226
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| ||||| | || | |||||||| |||||
Sbjct 143225 ATCCAGAAGGAGTCCACCCTTCACTTGGTTCTCCGTCTTCGTGGTGG 143179
Score = 163 bits (180), Expect = 3e-35
Identities = 158/203 (78%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || || || ||||||||||| |||| ||||| ||| | ||| |
Sbjct 143837 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACCATTGACAATGTCAAGTCC 143778
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || |||||||||||||| ||||| || ||||||||||| || ||||| ||||| |||
Sbjct 143777 AAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGCCTGATTTTCGCTGGCAAG 143718
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || ||||||| || ||||| | || || || |||| ||||| ||||| |||||
Sbjct 143717 CAGCTTGAGGATGGCCGCACCCTCTCCGATTACAACATCCAGAAGGAGTCCACCCTTCAC 143658
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || ||||| |||||
Sbjct 143657 CTTGTCCTCCGCCTTCGTGGTGG 143635
>seq438
Length=409217
Score = 150 bits (166), Expect = 2e-31
Identities = 164/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || || ||||| || || || ||||| ||||| || | |||
Sbjct 73466 TTCGTCAAGACCCTGACGGGTAAGACCATCACCCTGGAGGTCGAGTCTTCGGACACCATC 73407
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||| | || || |||||||||||||| ||||| || ||||||||||| ||
Sbjct 73406 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGCCTG 73347
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| || ||||| ||||| || ||||||| || ||||| | ||||| || |||| |||
Sbjct 73346 ATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCGGACTACAACATCCAGAAG 73287
Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||||||| || || ||| | ||||| || |||||
Sbjct 73286 GAGTCCACTCTCCACCTGGTCCTCCGTCTCCGTGGTGG 73249
>seq419
Length=149002
Score = 127 bits (140), Expect = 2e-24
Identities = 142/190 (75%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| ||||| || ||||| || || |||||||| |||||
Sbjct 86590 ATGCAGATTTTCGTTAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTCGAGTCTTCG 86531
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || || |||||||||||||| ||||| || ||||||
Sbjct 86530 GACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 86471
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || ||||| ||||| || ||||||| || ||||| | ||||| ||
Sbjct 86470 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTTCTGACTACAAC 86411
Query 27586 GTCCAAAAGG 27595
|||| ||||
Sbjct 86410 ATCCAGAAGG 86401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570307206261760
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