Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq191 91.5 9e-14
seq419 82.4 5e-11
>seq191
Length=257482
Score = 91.5 bits (100), Expect = 9e-14
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|||||||| |||||| |||||||| || || || || || || | || ||||| ||
Sbjct 143431 TGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCAAGCTGC 143490
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
||||| ||||| || | ||||||||||||||| || | |||||||||||
Sbjct 143491 TTACCAGCAAAGATAAGACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTC 143540
Score = 84.2 bits (92), Expect = 1e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||| ||||| || |||||| || ||||| || || || || || ||
Sbjct 142960 AGACGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGG 143019
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || || || ||||| ||||| || | |||||| |||||||| || | ||||||
Sbjct 143020 CCGTCCTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCC 143079
Query 34609 TTGTCTGTGATCTT 34622
||||| ||||||
Sbjct 143080 TTGTCCTGGATCTT 143093
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | ||||| || || ||| |||||| || ||||| || || ||
Sbjct 143179 CCACCACGAAGACGGAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 143238
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || ||||| || ||||| || || || | ||||| |||||||| ||
Sbjct 143239 AGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGG 143298
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||||| | ||||| | || || || ||| ||
Sbjct 143299 ATACCCTCCTTGTCCTGGATCTTC-GACTTAACATTGTCGATAGTATCCGACGACTCGAC 143357
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| || || || ||||| | || || || |||||||||||
Sbjct 143358 CTCAAGGGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAAATCTGCAT 143405
>seq419
Length=149002
Score = 82.4 bits (90), Expect = 5e-11
Identities = 147/211 (70%), Gaps = 3/211 (1%)
Strand=Plus/Plus
Query 34503 ATGGAGAGTG-CTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTT 34561
|||||| ||| || |||| || ||||| || || ||||| || || | || || || |
Sbjct 86386 ATGGAGGGTGACTAACCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCT 86445
Query 34562 GTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCT 34621
| || || || || || | ||||| |||||||| || | ||||||||||| ||||
Sbjct 86446 GCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATC- 86504
Query 34622 TTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCG 34680
|| | || ||| | || ||||| ||| || || | ||| ||||| |||||
Sbjct 86505 TTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTACCC 86564
Query 34681 GTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
|| | || || || ||||||||||| ||||
Sbjct 86565 GTAAGGGTCTTAACGAAAATCTGCATCTTGA 86595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314727881576384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |