Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq191 91.5 9e-14 seq419 82.4 5e-11 >seq191 Length=257482 Score = 91.5 bits (100), Expect = 9e-14 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 |||||||| |||||| |||||||| || || || || || || | || ||||| || Sbjct 143431 TGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCAAGCTGC 143490 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 ||||| ||||| || | ||||||||||||||| || | ||||||||||| Sbjct 143491 TTACCAGCAAAGATAAGACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTC 143540 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||| ||||| || |||||| || ||||| || || || || || || Sbjct 142960 AGACGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGG 143019 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || ||||| ||||| || | |||||| |||||||| || | |||||| Sbjct 143020 CCGTCCTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCC 143079 Query 34609 TTGTCTGTGATCTT 34622 ||||| |||||| Sbjct 143080 TTGTCCTGGATCTT 143093 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||| || || ||| |||||| || ||||| || || || Sbjct 143179 CCACCACGAAGACGGAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 143238 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| || ||||| || || || | ||||| |||||||| || Sbjct 143239 AGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGG 143298 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||||| | ||||| | || || || ||| || Sbjct 143299 ATACCCTCCTTGTCCTGGATCTTC-GACTTAACATTGTCGATAGTATCCGACGACTCGAC 143357 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || || ||||| | || || || ||||||||||| Sbjct 143358 CTCAAGGGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAAATCTGCAT 143405 >seq419 Length=149002 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/211 (70%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 34503 ATGGAGAGTG-CTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTT 34561 |||||| ||| || |||| || ||||| || || ||||| || || | || || || | Sbjct 86386 ATGGAGGGTGACTAACCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCT 86445 Query 34562 GTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCT 34621 | || || || || || | ||||| |||||||| || | ||||||||||| |||| Sbjct 86446 GCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATC- 86504 Query 34622 TTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCG 34680 || | || ||| | || ||||| ||| || || | ||| ||||| ||||| Sbjct 86505 TTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTACCC 86564 Query 34681 GTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 || | || || || ||||||||||| |||| Sbjct 86565 GTAAGGGTCTTAACGAAAATCTGCATCTTGA 86595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314727881576384